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Journal article (166) Conference paper (220) Book (1) Book chapter (6) Patent (1) Report Thesis Dataset Teaching resource Image Audio recording Video recording Other

Julien Cohen-Adad (394)

  • Journal articles (166)
    • 2023
      • Journal article
        D'Astous, A., Cereza, G., Papp, D., Gilbert, K.M., Stockmann, J.P., Alonso-Ortiz, E. & Cohen-Adad, J. (2023). Shimming toolbox: An open-source software toolbox for B0 and B1 shimming in MRI. Magnetic Resonance in Medicine, 89(4), 17 pages. Retrieved from https://doi.org/10.1002/mrm.29528
    • 2022
      • Journal article
        Khatibi, A., Vahdat, S., Lungu, O., Finsterbusch, J., Büchel, C., Cohen-Adad, J., Marchand-Pauvert, V. & Doyon, J. (2022). Brain-spinal cord interaction in long-term motor sequence learning in human: An fMRI study. NeuroImage, 253, 11 pages. Retrieved from https://doi.org/10.1016/j.neuroimage.2022.119111
      • Journal article
        Cohen-Adad, J., Alonso-Ortiz, E., Alley, S., Lagana, M.M., Baglio, F., Vannesjo, S.J., Karbasforoushan, H., Seif, M., Seifert, A.C., Xu, J., Kim, J.-W., Labounek, R., Vojtiek, L., Dostal, M., Valoek, J., Samson, R.S., Grussu, F., Battiston, M., Gandini Wheeler-Kingshott, C.A.M., Yiannakas, M.C., Gilbert, G., Schneider, T., Johnson, B. & Prados, F. (2022). Comparison of multicenter MRI protocols for visualizing the spinal cord gray matter. Magnetic Resonance in Medicine, 88(2), 849-859. Retrieved from https://doi.org/10.1002/mrm.29249
      • Journal article
        Yu, F.F., Huang, S.Y., Kumar, A., Witzel, T., Liao, C., Duval, T., Cohen-Adad, J. & Bilgic, B. (2022). Erratum: Rapid simultaneous acquisition of macromolecular tissue volume, susceptibility, and relaxometry maps (vol 87, pg 781, 2022). Magnetic Resonance in Medicine, 87(6), 3022-3023. Retrieved from https://doi.org/10.1002/mrm.29158
      • Journal article
        Nami, H., Perone, C.S. & Cohen-Adad, J. (2022). Histology-informed automatic parcellation of white matter tracts in the rat spinal cord. Frontiers in Neuroanatomy, 16, 12 pages. Retrieved from https://doi.org/10.3389/fnana.2022.960475
      • Journal article
        Bourget, M.-H., Kamentsky, L., Ghosh, S.S., Mazzamuto, G., Lazari, A., Markiewicz, C.J., Oostenveld, R., Niso, G., Halchenko, Y.O., Lipp, I., Takerkart, S., Toussaint, P.-J., Khan, A.R., Nilsonne, G., Castelli, F.M., Cohen-Adad, J., Appelhoff, S., Blair, R., Earl, E., Feingold, F., Galassi, A., Gau, R., Markiewicz, C.J. & Salo, T. (2022). Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data. Frontiers in Neuroscience, 16, 8 pages. Retrieved from https://doi.org/10.3389/fnins.2022.871228
      • Journal article
        Enguix, V., Kenley, J., Luck, D., Cohen-Adad, J. & Lodygensky, G.A. (2022). NeoRS: A Neonatal Resting State fMRI Data Preprocessing Pipeline. Frontiers in Neuroinformatics, 16, 16 pages. Retrieved from https://doi.org/10.3389/fninf.2022.843114
      • Journal article
        Huang, Y.N., Meftah, E.-M., Pion, C.H., Mac-Thiong, J.-M., Cohen-Adad, J. & Barthelemy, D. (2022). Quantitative electrophysiological assessments as predictive markers of lower limb motor recovery after spinal cord injury: a pilot study with an adaptive trial design. Spinal Cord Series and Cases, 8(1), 8 pages. Retrieved from https://doi.org/10.1038/s41394-022-00491-0
      • Journal article
        Daeschler, S.C., Bourget, M.-H., Derakhshan, D., Sharma, V., Asenov, S.I., Gordon, T., Cohen-Adad, J. & Borschel, G.H. (2022). Rapid, automated nerve histomorphometry through open-source artificial intelligence. Scientific Reports, 12(1), 13 pages. Retrieved from https://doi.org/10.1038/s41598-022-10066-6
      • Journal article
        Yu, F.F., Huang, S.Y., Kumar, A., Witzel, T., Liao, C.Y., Duval, T., Cohen-Adad, J. & Bilgic, B. (2022). Rapid simultaneous acquisition of macromolecular tissue volume, susceptibility, and relaxometry maps. Magnetic Resonance in Medicine, 87(2), 781-790. Retrieved from https://doi.org/10.1002/mrm.28995
      • Journal article
        Badji, A., Cohen-Adad, J. & Girouard, H. (2022). Relationship between arterial stiffness index, pulse pressure, and magnetic resonance imaging markers of white matter integrity: A UK biobank study. Frontiers in Aging Neuroscience, 14, 11 pages. Retrieved from https://doi.org/10.3389/fnagi.2022.856782
      • Journal article
        Karakuzu, A., Biswas, L., Cohen-Adad, J. & Stikov, N. (2022). Vendor-neutral sequences and fully transparent workflows improve inter-vendor reproducibility of quantitative MRI. Magnetic Resonance in Medicine, 88(3), 1212-1228. Retrieved from https://doi.org/10.1002/mrm.29292
    • 2021
      • Journal article
        Wong, A.L., Hricz, N., Malapati, H., von Guionneau, N., Wong, M., Harris, T., Boudreau, M., Cohen-Adad, J. & Tuffaha, S. (2021). A simple and robust method for automating analysis of naive and regenerating peripheral nerves. Plos One, 16(7), 14 pages. Retrieved from https://doi.org/10.1371/journal.pone.0248323
      • Journal article
        de la Colina, A.N., Badji, A., Robitaille-Grou, M.-C., Gagnon, C., Boshkovski, T., Lamarre-Cliche, M., Joubert, S., Gauthier, C.J., Bherer, L., Cohen-Adad, J. & Girouard, H. (2021). Associations Between Relative Morning Blood Pressure, Cerebral Blood Flow, and Memory in Older Adults Treated and Controlled for Hypertension. Hypertension, 77(5), 1703-1713. Retrieved from https://doi.org/10.1161/hypertensionaha.120.16124
      • Journal article
        Shahrampour, S., De Leener, B., Alizadeh, M., Middleton, D., Krisa, L., Flanders, A.E., Faro, S.H., Cohen-Adad, J. & Mohamed, F.B. (2021). Atlas-Based Quantification of DTI Measures in a Typically Developing Pediatric Spinal Cord. American Journal of Neuroradiology, 42(9), 1727-1734. Retrieved from https://doi.org/10.3174/ajnr.A7221
      • Journal article
        Lemay, A., Gros, C., Zhuo, Z., Zhang, J., Duan, Y., Cohen-Adad, J. & Liu, Y. (2021). Automatic multiclass intramedullary spinal cord tumor segmentation on MRI with deep learning. Neuroimage-Clinical, 31, 9 pages. Retrieved from https://doi.org/10.1016/j.nicl.2021.102766
      • Journal article
        Trò, R., Roascio, M., Tortora, D., Severino, M., Rossi, A., Cohen-Adad, J., Fato, M.M. & Arnulfo, G. (2021). Diffusion Kurtosis Imaging of neonatal Spinal Cord in clinical routine. Fontiers in Radiology, 18 pages. Retrieved from https://doi.org/10.3389/fradi.2022.794981
      • Journal article
        Valošek, J., Labounek, R., Horák, T., Horáková, M., Bednařík, P., Keřkovský, M., Kočica, J., Rohan, T., Lenglet, C., Cohen-Adad, J., Hluštík, P., Vlčková, E., Kadaňka Jr., Z., Bednařík, J. & Svatkova, A. (2021). Diffusion magnetic resonance imaging reveals tract-specific microstructural correlates of electrophysiological impairments in non-myelopathic and myelopathic spinal cord compression. European Journal of Neurology, 28(11), 3784-3797. Retrieved from https://doi.org/10.1111/ene.15027
      • Journal article
        Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R.L., Barth, M., Battiston, M., Buchel, C., Budde, M., Callot, V., Combes, A.J.E., De Leener, B., Descoteaux, M., de Sousa, P.L., Dostal, M., Doyon, J., Dvorak, A., Eippert, F., Epperson, K.R., Epperson, K.S., Freund, P., Finsterbusch, J., Foias, A., Fratini, M., Fukunaga, I., Wheeler-Kingshott, C.A.M.G., Germani, G., Gilbert, G., Giove, F., Gros, C., Grussu, F., Hagiwara, A., Henry, P.G., Horak, T., Hori, M., Joers, J., Kamiya, K., Karbasforoushan, H., Kerkovsky, M., Khatibi, A., Kim, J.W., Kinany, N., Kitzler, H., Kolind, S., Kong, Y.Z., Kudlicka, P., Kuntke, P., Kurniawan, N.D., Kusmia, S., Labounek, R., Lagana, M.M., Laule, C., Law, C.S., Lenglet, C., Leutritz, T., Liu, Y.O., Llufriu, S., Mackey, S., Martinez-Heras, E., Mattera, L., Nestrasil, I., O'Grady, K.P., Papinutto, N., Papp, D., Pareto, D., Parrish, T.B., Pichiecchio, A., Prados, F., Rovira, A., Ruitenberg, M.J., Samson, R.S., Savini, G., Seif, M., Seifert, A.C., Smith, A.K., Smith, S.A., Smith, Z.A., Solana, E., Suzuki, Y., Tackley, G., Tinnermann, A., Valosek, J., Van De Ville, D., Yiannakas, M.C., Weber, K.A., Weiskopf, N., Wise, R.G., Wyss, P.O. & Xu, J.Q. (2021). Generic acquisition protocol for quantitative MRI of the spinal cord. Nature Protocols, 16, 4611–4632. Retrieved from https://doi.org/10.1038/s41596-021-00588-0
      • Journal article
        Gros, C., Lemay, A., Vincent, O., Rouhier, L., Bourget, M.-H., Bucquet, A., Cohen, J.P. & Cohen-Adad, J. (2021). Ivadomed : a medical imaging deep learning toolbox. Journal of Open Source Software, 6(58), 5 pages. Retrieved from https://doi.org/10.21105/joss.02868
      • Journal article
        Bautin, P. & Cohen-Adad, J. (2021). Minimum detectable spinal cord atrophy with automatic segmentation: Investigations using an open-access dataset of healthy participants. Neuroimage-Clinical, 32, 10 pages. Retrieved from https://doi.org/10.1016/j.nicl.2021.102849
      • Journal article
        Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R.L., Barth, M., Battiston, M., Buchel, C., Budde, M., Callot, V., Combes, A.J.E., De Leener, B., Descoteaux, M., de Sousa, P.L., Dostal, M., Doyon, J., Dvorak, A., Eippert, F., Epperson, K.R., Epperson, K.S., Freund, P., Finsterbusch, J., Foias, A., Fratini, M., Fukunaga, I., Wheeler-Kingshott, C.A.M.G., Germani, G., Gilbert, G., Giove, F., Gros, C., Grussu, F., Hagiwara, A., Henry, P.G., Horak, T., Hori, M., Joers, J., Kamiya, K., Karbasforoushan, H., Kerkovsky, M., Khatibi, A., Kim, J.W., Kinany, N., Kitzler, H.H., Kolind, S., Kong, Y.Z., Kudlicka, P., Kuntke, P., Kurniawan, N.D., Kusmia, S., Labounek, R., Lagana, M.M., Laule, C., Law, C.S., Lenglet, C., Leutritz, T., Liu, Y., Llufriu, S., Mackey, S., Martinez-Heras, E., Mattera, L., Nestrasil, I., O'Grady, K.P., Papinutto, N., Papp, D., Pareto, D., Parrish, T.B., Pichiecchio, A., Prados, F., Rovira, A., Ruitenberg, M.J., Samson, R.S., Savini, G., Seif, M., Seifert, A.C., Smith, A.K., Smith, S.A., Smith, Z.A., Solana, E., Suzuki, Y., Tackley, G., Tinnermann, A., Valosek, J., van de Ville, D., Yiannakas, M.C., Weber, K.A., Weiskopf, N., Wise, R.G., Wyss, P.O. & Xu, J.Q. (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Scientific Data, 8(1), 17 pages. Retrieved from https://doi.org/10.1038/s41597-021-00941-8
      • Journal article
        Cohen-Adad, J., Alonso Ortiz, E., Abramovic, M., Arneitz, C., Atcheson, N., Barlow, L., Barry, R.L., Barth, M., Battiston, M., Buchel, C., Budde, M., Callot, V., Combes, A.J.E., De Leener, B., Descoteaux, M., de Sousa, P.L., Dostal, M., Doyon, J., Dvorak, A., Eippert, F., Epperson, K.R., Epperson, K.S., Freund, P., Finsterbusch, J., Foias, A., Fratini, M., Fukunaga, I., Wheeler-Kingshott, C.A.M.G., Germani, G., Gilbert, G., Giove, F., Gros, C., Grussu, F., Hagiwara, A., Henry, P.G., Horak, T., Hori, M., Joers, J., Kamiya, K., Karbasforoushan, H., Kerkovsky, M., Khatibi, A., Kim, J.W., Kinany, N., Kitzler, H.H., Kolind, S., Kong, Y.Z., Kudlicka, P., Kuntke, P., Kurniawan, N.D., Kusmia, S., Labounek, R., Lagana, M.M., Laule, C., Law, C.S., Lenglet, C., Leutritz, T., Liu, Y., Llufriu, S., Mackey, S., Martinez-Heras, E., Mattera, L., Nestrasil, I., O'Grady, K.P., Papinutto, N., Papp, D., Pareto, D., Parrish, T.B., Pichiecchio, A., Prados, F., Rovira, A., Ruitenberg, M.J., Samson, R.S., Savini, G., Seif, M., Seifert, A.C., Smith, A.K., Smith, S.A., Smith, Z.A., Solana, E., Suzuki, Y., Tackley, G., Tinnermann, A., Valosek, J., Van de Ville, D., Yiannakas, M.C., Weber, K.A., Weiskopf, N., Wise, R.G., Wyss, P.O. & Xu, J.Q. (2021). Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers (vol 8, 219, 2021). Scientific Data, 8(1), 1 page. Retrieved from https://doi.org/10.1038/s41597-021-01026-2
      • Journal article
        Cohen-Adad, J. (2021). Quantitative magnetic resonance imaging of spinal cord microstructure in adults with cerebral palsy. Developmental Medicine & Child Neurology, 63(8), 896-896. Retrieved from https://doi.org/10.1111/dmcn.14927
      • Journal article
        Barletta, V., Herranz, E., Treaba, C.A., Mehndiratta, A., Ouellette, R., Mangeat, G., Granberg, T., Sloane, J.A., Klawiter, E., Cohen-Adad, J. & Mainero, C. (2021). Quantitative 7-Tesla Imaging of Cortical Myelin Changes in Early Multiple Sclerosis. Frontiers in Neurology, 12, 10 pages. Retrieved from https://doi.org/10.3389/fneur.2021.714820
      • Journal article
        Lousada, E., Boudreau, M., Cohen-Adad, J., Oumesmar, B.N., Burguiere, E. & Schreiweis, C. (2021). Reduced Axon Calibre in the Associative Striatum of the Sapap3 Knockout Mouse. Brain Sciences, 11(10), 16 pages. Retrieved from https://doi.org/10.3390/brainsci11101353
      • Journal article
        Gros, C., Lemay, A. & Cohen-Adad, J. (2021). SoftSeg: Advantages of soft versus binary training for image segmentation. Medical Image Analysis, 71, 12 pages. Retrieved from https://doi.org/10.1016/j.media.2021.102038
      • Journal article
        McLachlin, S., Leung, J., Sivan, V., Quirion, P.-O., Wilkie, P., Cohen-Adad, J., Whyne, C.M. & Hardisty, M.R. (2021). Spatial correspondence of spinal cord white matter tracts using diffusion tensor imaging, fibre tractography, and atlas-based segmentation. Neuroradiology, 63(3), 373-380. Retrieved from https://doi.org/10.1007/s00234-021-02635-9
      • Journal article
        Ost, K., Jacobs, W.B., Evaniew, N., Cohen-Adad, J., Anderson, D. & Cadotte, D.W. (2021). Spinal Cord Morphology in Degenerative Cervical Myelopathy Patients; Assessing Key Morphological Characteristics Using Machine Vision Tools. Journal of Clinical Medicine, 10(4), 18 pages. Retrieved from https://doi.org/10.3390/jcm10040892
      • Journal article
        Boshkovski, T., Cohen-Adad, J., Misic, B., Arnulf, I., Corvol, J.-C., Vidailhet, M., Lehéricy, S., Stikov, N. & Mancini, M. (2021). The Myelin-Weighted Connectome in Parkinson's Disease. Movement Disorders, 37(4), 724-733. Retrieved from https://doi.org/10.1002/mds.28891
      • Journal article
        Boshkovski, T., Kocarev, L., Cohen-Adad, J., Mišić, B., Lehéricy, S., Stikov, N. & Mancini, M. (2021). The R1-weighted connectome: complementing brain networks with a myelin-sensitive measure. Network Neuroscience, 5(2), 358-372. Retrieved from https://doi.org/10.1162/netn_a_00179
      • Journal article
        Vallotton, K., David, G., Hupp, M., Pfender, N., Cohen-Adad, J., Fehlings, M.G., Samson, R.S., Wheeler-Kingshott, C.A.M.G., Curt, A., Freund, P. & Seif, M. (2021). Tracking White and Gray Matter Degeneration along the Spinal Cord Axis in Degenerative Cervical Myelopathy. Journal of Neurotrauma, 38(21), 2978-2987. Retrieved from https://doi.org/10.1089/neu.2021.0148
    • 2020
      • Journal article
        Badj, A., de la Colina, A.N., Boshkovski, T., Sabra, D., Karakuzu, A., Robitaille-Grou, M.-C., Gros, C., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Gauthier, C.J., Cohen-Adad, J. & Girouard, H. (2020). A Cross-Sectional Study on the Impact of Arterial Stiffness on the Corpus Callosum, a Key White Matter Tract Implicated in Alzheimer's Disease. Journal of Alzheimers Disease, 77(2), 591-605. Retrieved from https://doi.org/10.3233/jad-200668
      • Journal article
        Mancini, M., Karakuzu, A., Cohen-Adad, J., Cercignani, M., Nichols, T.E. & Stikov, N. (2020). An interactive meta-analysis of MRI biomarkers of myelin. Elife, 9, 23 pages. Retrieved from https://doi.org/10.7554/eLife.61523
      • Journal article
        Badji, A., Adrian, N.d.l.C., Karakuzu, A., Duval, T., Desjardins-Crepeau, L., Parizet, M., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Cohen-Adad, J. & Girouard, H. (2020). Arterial stiffness cut-off value and white matter integrity in the elderly. Neuroimage-Clinical, 26, 11 pages. Retrieved from https://doi.org/10.1016/j.nicl.2019.102007
      • Journal article
        Karbasforoushan, H., Cohen-Adad, J. & Dewald, J.P.A. (2020). Author Correction: Brainstem and spinal cord MRI identifies altered sensorimotor pathways post-stroke. Nature Communications, 11(1), 1 page. Retrieved from https://doi.org/10.1038/s41467-020-17024-8
      • Journal article
        Asgari Taghanaki, S., Abhishek, K., Cohen, J.P., Cohen-Adad, J. & Hamarneh, G. (2020). Deep semantic segmentation of natural and medical images: a review. Artificial Intelligence Review, 54(1), 137-178. Retrieved from https://doi.org/10.1007/s10462-020-09854-1
      • Journal article
        Labounek, R., Valosek, J., Horak, T., Svatkova, A., Bednarik, P., Vojtisek, L., Horakova, M., Nestrasil, I., Lenglet, C., Cohen-Adad, J., Bednarik, J. & Hlustik, P. (2020). HARDI-ZOOMit protocol improves specificity to microstructural changes in presymptomatic myelopathy. Scientific Reports, 10(1), 19 pages. Retrieved from https://doi.org/10.1038/s41598-020-70297-3
      • Journal article
        Bagnato, F., Gauthier, S.A., Laule, C., Moore, G.R.W., Bove, R., Cai, Z., Cohen-Adad, J., Harrison, D.M., Klawiter, E.C., Morrow, S.A., Oz, G., Rooney, W.D., Smith, S.A., Calabresi, P.A., Henry, R.G., Oh, J., Ontaneda, D., Pelletier, D., Reich, D.S., Shinohara, R.T. & Sicotte, N.L. (2020). Imaging Mechanisms of Disease Progression in Multiple Sclerosis: Beyond Brain Atrophy. Journal of Neuroimaging, 30(3), 251-266. Retrieved from https://doi.org/10.1111/jon.12700
      • Journal article
        Mummaneni, N., Burke, J.F., DiGiorgio, A.M., Thomas, L.H., Duong-Fernandez, X., Harris, M., Pascual, L.U., Ferguson, A.R., Huie, J.R., Pan, J.Z., Hemmerle, D.D., Singh, V., Torres-Espin, A., Omondi, C., Kyritsis, N., Weinstein, P.R., Wheatstone, W.D., Manley, G.T., Bresnahan, J.C., Beattie, M.S., Cohen-Adad, J., Dhall, S.S. & Talbott, J.F. (2020). Injury volume extracted from MRI predicts neurologic outcome in acute spinal cord injury: A prospective TRACK-SCI pilot study. Journal of Clinical Neuroscience, 82, 231-236. Retrieved from https://doi.org/10.1016/j.jocn.2020.11.003
      • Journal article
        Mangeat, G., Ouellette, R., Wabartha, M., De Leener, B., Platten, M., Karrenbauer, V.D., Warntjes, M., Stikov, N., Mainero, C., Cohen-Adad, J. & Granberg, T. (2020). Machine Learning and Multiparametric Brain MRI to Differentiate Hereditary Diffuse Leukodystrophy with Spheroids from Multiple Sclerosis. Journal of Neuroimaging, 30(5), 674-682. Retrieved from https://doi.org/10.1111/jon.12725
      • Journal article
        Grussu, F., Battiston, M., Veraart, J., Schneider, T., Cohen-Adad, J., Shepherd, T.M., Alexander, D.C., Fieremans, E., Novikov, D.S. & Wheeler-Kingshott, C.A.M.G. (2020). Multi-parametric quantitative in vivo spinal cord MRI with unified signal readout and image denoising. Neuroimage, 217, 16 pages. Retrieved from https://doi.org/10.1016/j.neuroimage.2020.116884
      • Journal article
        Kerbrat, A., Gros, C., Badji, A., Bannier, E., Galassi, F., Combes, B., Chouteau, R., Labauge, P., Ayrignac, X., Carra-Dalliere, C., Maranzano, J., Granberg, T., Ouellette, R., Stawiarz, L., Hillert, J., Talbott, J., Tachibana, Y., Hori, M., Kamiya, K., Chougar, L., Lefeuvre, J., Reich, D.S., Nair, G., Valsasina, P., Rocca, M.A., Filippi, M., Chu, R., Bakshi, R., Callot, V., Pelletier, J., Audoin, B., Maarouf, A., Collongues, N., De Seze, J., Edan, G. & Cohen-Adad, J. (2020). Multiple sclerosis lesions in motor tracts from brain to cervical cord: spatial distribution and correlation with disability. Brain, 143(7), 2089-2105. Retrieved from https://doi.org/10.1093/brain/awaa162
      • Journal article
        Herranz, E., Louapre, C., Treaba, C.A., Govindarajan, S.T., Ouellette, R., Mangeat, G., Loggia, M.L., Cohen-Adad, J., Klawiter, E.C., Sloane, J.A. & Mainero, C. (2020). Profiles of cortical inflammation in multiple sclerosis by 11C-PBR28 MR-PET and 7 Tesla imaging. Multiple Sclerosis Journal, 26(12), 1497-1509. Retrieved from https://doi.org/10.1177/1352458519867320
      • Journal article
        Karakuzu, A., Boudreau, M., Duval, T., Boshkovski, T., Leppert, I.R., Cabana, J.-F., Gagnon, I., Beliveau, P., Pike, G.B., Cohen-Adad, J. & Stikov, N. (2020). qMRLab: Quantitative MRI analysis, under one umbrella. Journal of Open Source Software, 5(53), 4 pages. Retrieved from https://doi.org/10.21105/joss.02343
      • Journal article
        Vahdat, S., Khatibi, A., Lungu, O., Finsterbusch, J., Buchel, C., Cohen-Adad, J., Marchand-Pauvert, V. & Doyon, J. (2020). Resting-state brain and spinal cord networks in humans are functionally integrated. Plos Biology, 18(7), 22 pages. Retrieved from https://doi.org/10.1371/journal.pbio.3000789
      • Journal article
        Chougar, L., Hagiwara, A., Takano, N., Andica, C., Cohen-Adad, J., Warntjes, M., Maekawa, T., Hori, M., Koshino, S., Nakazawa, M., Abe, O. & Aoki, S. (2020). Signal Intensity within Cerebral Venous Sinuses on Synthetic MRI. Magnetic Resonance in Medical Sciences, 19(1), 56-63. Retrieved from https://doi.org/10.2463/mrms.mp.2018-0144
      • Journal article
        Ouellette, R., Treaba, C.A., Granberg, T., Herranz, E., Barletta, V., Mehndiratta, A., De Leener, B., Tauhid, S., Yousuf, F., Dupont, S.M., Klawiter, E.C., Sloane, J.A., Bakshi, R., Cohen-Adad, J. & Mainero, C. (2020). 7 T imaging reveals a gradient in spinal cord lesion distribution in multiple sclerosis. Brain, 143, 2973-2987. Retrieved from https://doi.org/10.1093/brain/awaa249
      • Journal article
        Ouellette, R., Mangeat, G., Polyak, I., Warntjes, M., Forslin, Y., Bergendal, A., Platten, M., Uppman, M., Treaba, C.A., Cohen-Adad, J., Piehl, F., Wiberg, M.K., Fredrikson, S., Mainero, C. & Granberg, T. (2020). Validation of Rapid Magnetic Resonance Myelin Imaging in Multiple Sclerosis. Annals of Neurology, 87(5), 710-724. Retrieved from https://doi.org/10.1002/ana.25705
    • 2019
      • Journal article
        Badji, A., Sabra, D., Bherer, L., Cohen-Adad, J., Girouard, H. & Gauthier, C.J. (2019). Arterial stiffness and brain integrity: A review of MRI findings. Ageing Research Reviews, 53, 11 pages. Retrieved from https://doi.org/10.1016/j.arr.2019.05.001
      • Journal article
        Badji, A., de la Colina, A.N., Karakuzu, A., Duval, T., Desjardins-Crepeau, L., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Girouard, H. & Cohen-Adad, J. (2019). Arterial stiffness and white matter integrity in the elderly: a diffusion tensor and magnetization transfer imaging study. Neuroimage, 186, 577-585. Retrieved from https://doi.org/10.1016/j.neuroimage.2018.11.015
      • Journal article
        Gros, C., De Leener, B., Badji, A., Maranzano, J., Eden, D., Dupont, S.M., Talbott, J., Zhuoquiong, R., Liu, Y., Granberg, T., Ouellette, R., Tachibana, Y., Hori, M., Kamiya, K., Chougar, L., Stawiarz, L., Hillert, J., Bannier, E., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., Audoin, B., Rasoanandrianina, H., Brisset, J.-C., Valsasina, P., Rocca, M.A., Filippi, M., Bakshi, R., Tauhid, S., Prados, F., Yiannakas, M., Kearney, H., Ciccarelli, O., Smith, S., Treaba, C.A., Mainero, C., Lefeuvre, J., Reich, D.S., Nair, G., Auclair, V., McLaren, D.G., Martin, A.R., Fehlings, M.G., Vahdat, S., Khatibi, A., Doyon, J., Shepherd, T., Charlson, E., Narayanan, S. & Cohen-Adad, J. (2019). Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. NeuroImage, 184, 901-915. Retrieved from https://doi.org/10.1016/j.neuroimage.2018.09.081
      • Journal article
        Duval, T., Saliani, A., Nami, H., Nanci, A., Stikov, N., Leblond, H. & Cohen-Adad, J. (2019). Axons morphometry in the human spinal cord. NeuroImage, 185, 119-128. Retrieved from https://doi.org/10.1016/j.neuroimage.2018.10.033
      • Journal article
        Karbasforoushan, H., Cohen-Adad, J. & Dewald, J.P.A. (2019). Brainstem and spinal cord MRI identifies altered sensorimotor pathways post-stroke. Nature Communications, 10, 7 pages. Retrieved from https://doi.org/10.1038/s41467-019-11244-3
      • Journal article
        Saliani, A., Zaimi, A., Nami, H., Duval, T., Stikov, N. & Cohen-Adad, J. (2019). Construction of a rat spinal cord atlas of axon morphometry. Neuroimage, 202, 14 pages. Retrieved from https://doi.org/10.1016/j.neuroimage.2019.116156
      • Journal article
        McCoy, D.B., Dupont, S.M., Gros, C., Cohen-Adad, J., Huie, R.J., Ferguson, A., Duong-Fernandez, X., Thomas, L.H., Singh, V., Narvid, J., Pascual, L., Kyritsis, N., Beattie, M.S., Bresnahan, J.C., Dhall, S., Whetstone, W., Talbott, J.F. & Investigators, T.-S. (2019). Convolutional Neural Network-Based Automated Segmentation of the Spinal Cord and Contusion Injury: Deep Learning Biomarker Correlates of Motor Impairment in Acute Spinal Cord Injury. American Journal of Neuroradiology, 40(4), 737-744. Retrieved from https://doi.org/10.3174/ajnr.A6020
      • Journal article
        Andica, C., Hagiwara, A., Kamagata, K., Yokoyama, K., Shimoji, K., Saito, A., Takenaka, Y., Nakazawa, M., Hori, M., Cohen-Adad, J., Takemura, M.Y., Hattori, N. & Aoki, S. (2019). Gray Matter Alterations in Early and Late Relapsing-Remitting Multiple Sclerosis Evaluated with Synthetic Quantitative Magnetic Resonance Imaging. Scientific Reports, 9(1), 8147-8156. Retrieved from https://doi.org/10.1038/s41598-019-44615-3
      • Journal article
        Seif, M., Wheeler-Kingshott, C.A.M.G., Cohen-Adad, J., Flanders, A.E. & Freund, P. (2019). Guidelines for the conduct of clinical trials in spinal cord injury: Neuroimaging biomarkers. Spinal Cord, 57(9), 717-728. Retrieved from https://doi.org/10.1038/s41393-019-0309-x
      • Journal article
        Paugam, F., Lefeuvre, J., Perone, C.S., Gros, C., Reich, D.S., Sati, P. & Cohen-Adad, J. (2019). Open-source pipeline for multi-class segmentation of the spinal cord with deep learning. Magnetic Resonance Imaging, 64, 21-27. Retrieved from https://doi.org/10.1016/j.mri.2019.04.009
      • Journal article
        Querin, G., Bede, P., El Mendili, M.-M., Li, M., Pelegrini-Issac, M., Rinaldi, D., Catala, M., Saracino, D., Salachas, F., Camuzat, A., Marchand-Pauvert, V., Cohen-Adad, J., Colliot, O., Le Ber, I. & Pradat, P.-F. (2019). Presymptomatic Spinal Cord Pathology In c9orf72 Mutation Carriers: A Longitudinal Neuroimaging Study. Annals of Neurology, 86(2), 158-167. Retrieved from https://doi.org/10.1002/ana.25520
      • Journal article
        Eden, D., Gros, C., Badji, A., Dupont, S.M., De Leener, B., Maranzano, J., Zhuoquiong, R., Liu, Y., Granberg, T., Ouellette, R., Stawiarz, L., Hillert, J., Talbott, J., Bannier, E., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., Audoin, B., Rasoanandrianina, H., Brisset, J.-C., Valsasina, P., Rocca, M.A., Filippi, M., Bakshi, R., Tauhid, S., Prados, F., Yiannakas, M., Kearney, H., Ciccarelli, O., Smith, S.A., Andrada Treaba, C., Mainero, C., Lefeuvre, J., Reich, D.S., Nair, G., Shepherd, T.M., Charlson, E., Tachibana, Y., Hori, M., Kamiya, K., Chougar, L., Narayanan, S. & Cohen-Adad, J. (2019). Spatial distribution of multiple sclerosis lesions in the cervical spinal cord. Brain, 142, 633-646. Retrieved from https://doi.org/10.1093/brain/awy352
      • Journal article
        Querin, G., El Mendili, M.-M., Lenglet, T., Behin, A., Stojkovic, T., Salachas, F., Devos, D., Le Forestier, N., del Mar Amador, M., Debs, R., Lacomblez, L., Meninger, V., Bruneteau, G., Cohen-Adad, J., Lehéricy, S., Laforêt, P., Blancho, S., Benali, H., Catala, M., Li, M., Marchand-Pauvert, V., Hogrel, J.-Y., Bede, P. & Pradat, P.-F. (2019). The spinal and cerebral profile of adult spinal-muscular atrophy: A multimodal imaging study. NeuroImage: Clinical, 21, 9 pages. Retrieved from https://doi.org/10.1016/j.nicl.2018.101618
      • Journal article
        David, G., Mohammadi, S., Martin, A.R., Cohen-Adad, J., Weiskopf, N., Thompson, A. & Freund, P. (2019). Traumatic and nontraumatic spinal cord injury: pathological insights from neuroimaging. Nature Reviews Neurology, 15(12), 718-731. Retrieved from https://doi.org/10.1038/s41582-019-0270-5
      • Journal article
        Perone, C.S., Ballester, P., Barros, R.C. & Cohen-Adad, J. (2019). Unsupervised domain adaptation for medical imaging segmentation with self-ensembling. Neuroimage, 194, 11 pages. Retrieved from https://doi.org/10.1016/j.neuroimage.2019.03.026
    • 2018
      • Journal article
        De Tillieux, P., Topfer, R., Foias, A., Leroux, I., El Maachi, I., Leblond, H., Stikov, N. & Cohen-Adad, J. (2018). A pneumatic phantom for mimicking respiration-induced artifacts in spinal MRI. Magnetic Resonance in Medicine, 79(1), 600-605. Retrieved from https://doi.org/10.1002/mrm.26679
      • Journal article
        Gros, C., De Leener, B., Dupont, S.M., Martin, A.R., Fehlings, M.G., Bakshi, R., Tummala, S., Auclair, V., McLaren, D.G., Callot, V., Cohen-Adad, J. & Sdika, M. (2018). Automatic spinal cord localization, robust to MRI contrasts using global curve optimization. Medical Image Analysis, 44, 215-227. Retrieved from https://doi.org/10.1016/j.media.2017.12.001
      • Journal article
        Zaimi, A., Wabartha, M., Herman, V., Antonsanti, P.-L., Perone, C.S. & Cohen-Adad, J. (2018). AxonDeepSeg: automatic axon and myelin segmentation from microscopy data using convolutional neural networks. Scientific Reports, 8, 11 pages. Retrieved from https://doi.org/10.1038/s41598-018-22181-4
      • Journal article
        Martin, A.R., De Leener, B., Cohen-Adad, J., Cadotte, D.W., Nouri, A., Wilson, J.R., Tetreault, L., Crawley, A.P., Mikulis, D.J., Ginsberg, H. & Fehlings, M.G. (2018). Can microstructural MRI detect subclinical tissue injury in subjects with asymptomatic cervical spinal cord compression? A prospective cohort study. BMJ Open, 8(4), 11 pages. Retrieved from https://doi.org/10.1136/bmjopen-2017-019809
      • Journal article
        Mangeat, G., Badji, A., Ouellette, R., Treaba, C.A., Herranz, E., Granberg, T., Louapre, C., Stikov, N., Sloane, J.A., Bellec, P., Mainero, C. & Cohen-Adad, J. (2018). Changes in structural network are associated with cortical demyelination in early multiple sclerosis. Human Brain Mapping, 39(5), 2133-2146. Retrieved from https://doi.org/10.1002/hbm.23993
      • Journal article
        Lopez Rios, N., Pouliot, P., Papoutsis, K., Foias, A., Stikov, N., Lesage, F., Dehaes, M. & Cohen-Adad, J. (2018). Design and construction of an optimized transmit/receive hybrid birdcage resonator to improve full body images of medium-sized animals in 7T scanner. PLoS One, 13(2), 14 pages. Retrieved from https://doi.org/10.1371/journal.pone.0192035
      • Journal article
        Morozov, D., Lopez Rios, N., Duval, T., Foias, A. & Cohen-Adad, J. (2018). Effect of cardiac-related translational motion in diffusion MRI of the spinal cord. Magnetic Resonance Imaging, 50, 119-124. Retrieved from https://doi.org/10.1016/j.mri.2018.04.001
      • Journal article
        Lee, L.E., Ljungberg, E., Shin, D., Figley, C.R., Vavasour, I.M., Rauscher, A., Cohen-Adad, J., Li, D.K.B., Traboulsee, A.L., MacKay, A.L., Lee, J. & Kolind, S.H. (2018). Inter-vendor reproducibility of myelin water imaging using a 3D gradient and spin echo sequence. Frontiers in Neuroscience, 12, 8 pages. Retrieved from https://doi.org/10.3389/fnins.2018.00854
      • Journal article
        Hagiwara, A., Hori, M., Cohen-Adad, J., Nakazawa, M., Suzuki, Y., Kasahara, A., Horita, M., Haruyama, T., Andica, C., Maekawa, T., Kamagata, K., Kumamaru, K.K., Abe, O. & Aoki, S. (2018). Linearity, Bias, Intrascanner Repeatability, and Interscanner Reproducibility of Quantitative Multidynamic Multiecho Sequence for Rapid Simultaneous Relaxometry at 3 T: A Validation Study With a Standardized Phantom and Healthy Controls. Investigative Radiology, 54(1), 39-47. Retrieved from https://doi.org/10.1097/RLI.0000000000000510
      • Journal article
        Martin, A.R., De Leener, B., Cohen-Adad, J., Kalsi-Ryan, S., Cadotte, D.W., Wilson, J.R., Tetreauttl, L., Nouri, A., Crawley, A., Mikulis, D.J., Ginsberg, H., Massicotte, E.M. & Fehlings, M.G. (2018). Monitoring for myelopathic progression with multiparametric quantitative MRI. PLoS One, 13(4), 17 pages. Retrieved from https://doi.org/10.1371/journal.pone.0195733
      • Journal article
        Albrecht, D.S., Ahmed, S.U., Kettner, N.W., Borra, R.J.H., Cohen-Adad, J., Deng, H., Houle, T.T., Opalacz, A., Roth, S.A., Melo, M.F.V., Chen, L., Mao, J., Hooker, J.M., Loggia, M.L. & Zhang, Y. (2018). Neuroinflammation of the spinal cord and nerve roots in chronic radicular pain patients. Pain, 159(5), 968-977. Retrieved from https://doi.org/10.1097/j.pain.0000000000001171
      • Journal article
        De Leener, B., Fonov, V.S., Collins, D.L., Callot, V., Stikov, N. & Cohen-Adad, J. (2018). PAM50: Unbiased multimodal template of the brainstem and spinal cord aligned with the ICBM152 space. Neuroimage, 165, 170-179. Retrieved from https://doi.org/10.1016/j.neuroimage.2017.10.041
      • Journal article
        Calabrese, E., Adil, S.M., Cofer, G., Perone, C.S., Cohen-Adad, J., Lad, S.P. & Johnson, G.A. (2018). Postmortem diffusion MRI of the entire human spinal cord at microscopic resolution. Neuroimage-Clinical, 18, 963-971. Retrieved from https://doi.org/10.1016/j.nicl.2018.03.029
      • Journal article
        Topfer, R., Foias, A., Stikov, N. & Cohen-Adad, J. (2018). Real-time correction of respiration-induced distortions in the human spinal cord using a 24-channel shim array. Magnetic Resonance in Medicine, 80(3), 935-946. Retrieved from https://doi.org/10.1002/mrm.27089
      • Journal article
        Duval, T., Smith, V., Stikov, N., Klawiter, E.C. & Cohen-Adad, J. (2018). Scan-rescan of axcaliber, macromolecular tissue volume, and g-ratio in the spinal cord. Magnetic Resonance in Medicine, 79(5), 2759-2765. Retrieved from https://doi.org/10.1002/mrm.26945
      • Journal article
        Lopez Rios, N., Foias, A., Lodygensky, G., Dehaes, M. & Cohen-Adad, J. (2018). Size-adaptable 13-channel receive array for brain MRI in human neonates at 3T. NMR in Biomedicine, 31(8), 12 pages. Retrieved from https://doi.org/10.1002/nbm.3944
      • Journal article
        Paquin, M.E., El Mendili, M.M., Gros, C., Dupont, S.M., Cohen-Adad, J. & Pradat, P.F. (2018). Spinal Cord Gray Matter Atrophy in Amyotrophic Lateral Sclerosis. American Journal of Neuroradiology, 39(1), 184-192. Retrieved from https://doi.org/10.3174/ajnr.A5427
      • Journal article
        Perone, C.S., Calabrese, E. & Cohen-Adad, J. (2018). Spinal cord gray matter segmentation using deep dilated convolutions. Scientific Reports, 8, 13 pages. Retrieved from https://doi.org/10.1038/s41598-018-24304-3
      • Journal article
        Levy, S., Guertin, M.C., Khatibi, A., Mezer, A., Martinu, K., Chen, J.I., Stikov, N., Rainville, P. & Cohen-Adad, J. (2018). Test-retest reliability of myelin imaging in the human spinal cord: Measurement errors versus region- and aging-induced variations. Plos One, 13(1), 25 pages. Retrieved from https://doi.org/10.1371/journal.pone.0189944
      • Journal article
        Cadotte, D.W., Akbar, M.A., Fehlings, M.G., Stroman, P.W. & Cohen-Adad, J. (2018). What Has Been Learned from Magnetic Resonance Imaging Examination of the Injured Human Spinal Cord: A Canadian Perspective. Journal of Neurotrauma, 35(16), 1942-1957. Retrieved from https://doi.org/10.1089/neu.2018.5903
    • 2017
      • Journal article
        Martin, A.R., De Leener, B., Cohen-Adad, J., Cadotte, D.W., Kalsi-Ryan, S., Lange, S.F., Tetreault, L., Nouri, A., Crawley, A., Mikulis, D.J., Ginsberg, H. & Fehlings, M.G. (2017). A Novel MRI Biomarker of Spinal Cord White Matter Injury: T2*-Weighted White Matter to Gray Matter Signal Intensity Ratio. American Journal of Neuroradiology, 38(6), 1266-1273. Retrieved from https://doi.org/10.3174/ajnr.A5162
      • Journal article
        Saliani, A., Perraud, B., Duval, T., Stikov, N., Rossignol, S. & Cohen-Adad, J. (2017). Axon and myelin morphology in animal and human spinal cord. Frontiers in Neuroanatomy, 11. Retrieved from https://doi.org/10.3389/fnana.2017.00129
      • Journal article
        Mingasson, T., Duval, T., Stikov, N. & Cohen-Adad, J. (2017). AxonPacking: An Open-Source Software to Simulate Arrangements of Axons in White Matter. Frontiers in Neuroinformatics, 11, 12 pages. Retrieved from https://doi.org/10.3389/fninf.2017.00005
      • Journal article
        Khoshnejad, M., Roy, M., Martinu, K., Chen, J.I., Cohen-Adad, J., Grondin, S. & Rainville, P. (2017). Brain processing of the temporal dimension of acute pain in short-term memory. Pain, 158(10), 2001-2011. Retrieved from https://doi.org/10.1097/j.pain.0000000000001003
      • Journal article
        Martin, A.R., De Leener, B., Cohen-Adad, J., Cadotte, D.W., Kalsi-Ryan, S., Lange, S.F., Tetreault, L., Nouri, A., Crawley, A., Mikulis, D.J., Ginsberg, H. & Fehlings, M.G. (2017). Clinically Feasible Microstructural MRI to Quantify Cervical Spinal Cord Tissue Injury Using DTI, MT, and T2*-Weighted Imaging: Assessment of Normative Data and Reliability. American Journal of Neuroradiology, 38(6), 1257-1265. Retrieved from https://doi.org/10.3174/ajnr.A5163
      • Journal article
        Dupont, S.M., De Leener, B., Taso, M., Le Troter, A., Nadeau, S., Stikov, N., Callot, V. & Cohen-Adad, J. (2017). Fully-integrated framework for the segmentation and registration of the spinal cord white and gray matter. Neuroimage, 150, 358-372. Retrieved from https://doi.org/10.1016/j.neuroimage.2016.09.026
      • Journal article
        Cohen-Adad, J. (2017). Functional Magnetic Resonance Imaging of the Spinal Cord: Current Status and Future Developments. Seminars in Ultrasound CT and MRI, 38(2), 176-186. Retrieved from https://doi.org/10.1053/j.sult.2016.07.007
      • Journal article
        Duval, T., Levy, S., Stikov, N., Campbell, J., Mezer, A., Witzel, T., Keil, B., Smith, V., Wald, L.L., Klawiter, E. & Cohen-Adad, J. (2017). g-Ratio weighted imaging of the human spinal cord in vivo. Neuroimage, 145(A), 11-23. Retrieved from https://doi.org/10.1016/j.neuroimage.2016.09.018
      • Journal article
        Granberg, T., Fan, Q., Treaba, C.A., Ouellette, R., Herranz, E., Mangeat, G., Louapre, C., Cohen-Adad, J., Klawiter, E.C., Sloane, J.A. & Mainero, C. (2017). In vivo characterization of cortical and white matter neuroaxonal pathology in early multiple sclerosis. Brain, 140(11), 2912-2926. Retrieved from https://doi.org/10.1093/brain/awx247
      • Journal article
        McCoy, D.B., Talbott, J.F., Wilson, M., Mamlouk, M.D., Cohen-Adad, J., Wilson, M. & Narvid, J. (2017). MRI Atlas-Based Measurement of Spinal Cord Injury Predicts Outcome in Acute Flaccid Myelitis. American Journal of Neuroradiology, 38(2), 410-417. Retrieved from https://doi.org/10.3174/ajnr.A5044
      • Journal article
        De Leener, B., Levy, S., Dupont, S.M., Fonov, V.S., Stikov, N., Collins, D.L., Callot, V. & Cohen-Adad, J. (2017). SCT: Spinal Cord Toolbox, an open-source software for processing spinal cord MRI data. Neuroimage, 145, 24-43. Retrieved from https://doi.org/10.1016/j.neuroimage.2016.10.009
      • Journal article
        Prados, F., Ashburner, J., Blaiotta, C., Brosch, T., Carballido-Gamio, J., Cardoso, M.J., Conrad, B.N., Datta, E., David, G., De Leener, B., Dupont, S.M., Freund, P., Wheeler-Kingshott, C.A.M.G., Grussu, F., Henry, R., Landman, B.A., Ljungberg, E., Lyttle, B., Ourselin, S., Papinutto, N., Saporito, S., Schlaeger, R., Smith, S.A., Summers, P., Tam, R., Yiannakas, M.C., Zhu, A. & Cohen-Adad, J. (2017). Spinal cord grey matter segmentation challenge. Neuroimage, 152, 312-329. Retrieved from https://doi.org/10.1016/j.neuroimage.2017.03.010
      • Journal article
        De Leener, B., Mangeat, G., Dupont, S., Martin, A.R., Callot, V., Stikov, N., Fehlings, M.G. & Cohen-Adad, J. (2017). Topologically Preserving Straightening of Spinal Cord MRI. Journal of Magnetic Resonance Imaging, 46(4), 1209-1219. Retrieved from https://doi.org/10.1002/jmri.25622
    • 2016
      • Journal article
        Topfer, R., Starewicz, P., Lo, K.M., Metzemaekers, K., Jette, D., Hetherington, H.P., Stikov, N. & Cohen-Adad, J. (2016). A 24-channel shim array for the human spinal cord: Design, evaluation, and application. Magnetic Resonance in Medicine, 76(5), 1604-1611. Retrieved from https://doi.org/10.1002/mrm.26354
      • Journal article
        Zaimi, A., Duval, T., Gasecka, A., Cote, D., Stikov, N. & Cohen-Adad, J. (2016). AxonSeg: Open Source Software for Axon and Myelin Segmentation and Morphometric Analysis. Frontiers in Neuroinformatics, 10, 13 pages. Retrieved from https://doi.org/10.3389/fninf.2016.00037
      • Journal article
        Cameron Craddock, R., D, S.M., Bellec, P., Nolan Nichols, B., Alcauter, S., F, A.B., Burnod, Y., C, J.C., Cohen-Adad, J., De Leener, B., Dery, S., Downar, J., Dunlop, K., A, R.F., Seligman Froehlich, C., A, J.G., S, S.G., T, J.G., Hill, S., Solon Heinsfeld, A., Matthew Hutchison, R., Kundu, P., A, R.L., Liew, S.L., D, J.L., D, G.M., Meneguzzi, F., Mennes, M., Mesmoudi, S., O'Connor, D., E, H.P., Peltier, S., Poline, J.B., Prasad, G., Fraga Pereira, R., Quirion, P.O., Rokem, A., Z, S.S., Shi, Y., S, C.S., Toro, R., L, Q.U., J, D.V.H., J, W.V.M., R, C.W. & Xu, T. (2016). Brainhack: a collaborative workshop for the open neuroscience community. Gigascience, 5, 8 pages. Retrieved from https://doi.org/10.1186/s13742-016-0121-x
      • Journal article
        Yiannakas, M.C., Mustafa, A.M., De Leener, B., Kearney, H., Tur, C., Altmann, D.R., De Angelis, F., Plantone, D., Ciccarelli, O., Miller, D.H., Cohen-Adad, J. & Wheeler-Kingshott, C.A.M.G. (2016). Fully automated segmentation of the cervical cord from T1-weighted MRI using PropSeg: Application to multiple sclerosis. NeuroImage: Clinical, 10, 71-77. Retrieved from https://doi.org/10.1016/j.nicl.2015.11.001
      • Journal article
        Louapre, C., Govindarajan, S.T., Gianni, C., Cohen-Adad, J., Gregory, M.D., Nielsen, A.S., Madigan, N., Sloane, J.A., Kinkel, R.P. & Mainero, C. (2016). Is the Relationship between Cortical and White Matter Pathologic Changes in Multiple Sclerosis Spatially Specific? A Multimodal 7-T and 3-T MR Imaging Study with Surface and Tract-based Analysis. Radiology, 278(2), 524-35. Retrieved from https://doi.org/10.1148/radiol.2015150486
      • Journal article
        Martin, A.R., De Leener, B., Cohen-Adad, J., Aleksanderek, I., Cadotte, D.W., Kalsi-Ryan, S., Tetreault, L., Crawley, A., Ginsberg, H.J. & Fehlings, M.G. (2016). Microstructural MRI Quantifies Tract-Specific Injury and Correlates With Global Disability and Focal Neurological Deficits in Degenerative Cervical Myelopathy. Neurosurgery, 63(CN_suppl_1), 165-165. Retrieved from https://doi.org/10.1227/01.neu.0000489732.76982.7f
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        De Leener, B., Taso, M., Cohen-Adad, J. & Callot, V. (2016). Segmentation of the human spinal cord. Magnetic Resonance Materials in Physics, Biology and Medicine, 29(2), 125-153. Retrieved from https://doi.org/10.1007/s10334-015-0507-2
      • Journal article
        Martin, A.R., Aleksanderek, I., Cohen-Adad, J., Tarmohamed, Z., Tetreault, L., Smith, N., Cadotte, D.W., Crawley, A., Ginsberg, H., Mikulis, D.J. & Fehlings, M.G. (2016). Translating state-of-the-art spinal cord MRI techniques to clinical use: A systematic review of clinical studies utilizing DTI, MT, MWF, MRS, and fMRI. NeuroImage: Clinical, 10, 192-238. Retrieved from https://doi.org/10.1016/j.nicl.2015.11.019
      • Journal article
        Samson, R.S., Lévy, S., Schneider, T., Smith, A.K., Smith, S.A., Cohen-Adad, J. & Wheeler-Kingshott, C.A.M.G. (2016). ZOOM or non-ZOOM? Assessing spinal cord diffusion tensor imaging protocols for multi-centre studies. PLoS ONE, 11(5), 1-14. Retrieved from https://doi.org/10.1371/journal.pone.0155557
    • 2015
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        Mainero, C., Louapre, C., Govindarajan, S.T., Gianni, C., Nielsen, A.S., Cohen-Adad, J., Sloane, J. & Kinkel, R.P. (2015). A gradient in cortical pathology in multiple sclerosis by in vivo quantitative 7 T imaging. Brain, 138, 932-945. Retrieved from https://doi.org/10.1093/brain/awv011
      • Journal article
        Taso, M., Le Troter, A., Sdika, M., Cohen-Adad, J., Arnoux, P.J., Guye, M., Ranjeva, J.P. & Callot, V. (2015). A reliable spatially normalized template of the human spinal cord - Applications to automated white matter/gray matter segmentation and tensor-based morphometry (TBM) mapping of gray matter alterations occurring with age. Neuroimage, 117, 20-28. Retrieved from https://doi.org/10.1016/j.neuroimage.2015.05.034
      • Journal article
        De Leener, B., Cohen-Adad, J. & Kadoury, S. (2015). Automatic Segmentation of the spinal cord and spinal canal coupled with vertebral labeling. IEEE Transactions on Medical Imaging, 34(8), 1705-1718. Retrieved from https://doi.org/10.1109/TMI.2015.2437192
      • Journal article
        Cadotte, D.W., Cadotte, A., Cohen-Adad, J., Fleet, D., Livne, M., Wilson, J.R., Mikulis, D., Nugaeva, N. & Fehlings, M.G. (2015). Characterizing the Location of Spinal and Vertebral Levels in the Human Cervical Spinal Cord. American Journal of Neuroradiology, 36(4), 803-810. Retrieved from https://doi.org/10.3174/ajnr.A4192
      • Journal article
        Stikov, N., Campbell, J.S.W., Stroh, T., Lavelee, M., Frey, S., Novek, J., Nuara, S., Ho, M.K., Bedell, B.J., Dougherty, R.F., Leppert, I.R., Boudreau, M., Narayanan, S., Duval, T., Cohen-Adad, J., Picard, P.A., Gasecka, A., Cote, D. & Pike, G.B. (2015). In vivo histology of the myelin g-ratio with magnetic resonance imaging. Neuroimage, 118, 397-405. Retrieved from https://doi.org/10.1016/j.neuroimage.2015.05.023
      • Journal article
        Duval, T., McNab, J.A., Setsompop, K., Witzel, T., Schneider, T., Huang, S.Y., Keil, B., Klawiter, E.C., Wald, L.L. & Cohen-Adad, J. (2015). In vivo mapping of human spinal cord microstructure at 300 mT/m. Neuroimage, 118, 494-507. Retrieved from https://doi.org/10.1016/j.neuroimage.2015.06.038
      • Journal article
        Mangeat, G., Govindarajan, S.T., Maineroc, C. & Cohen-Adad, J. (2015). Multivariate combination of magnetization transfer, T-2* and B0 orientation to study the myelo-architecture of the in vivo human cortex. Neuroimage, 119, 89-102. Retrieved from https://doi.org/10.1016/j.neuroimage.2015.06.033
      • Journal article
        Mangeat, G., Louapre, C., Herranz, E., Treaba, C.A., Ouellette, R., Sloane, J.A., Klawiter, E.C., Cohen-Adad, J. & Mainero, C. (2015). Multivariate combination of quantitative T-2* and T-1 at 7T MRI detects in vivo subpial demyelination in the early stages of MS. Multiple Sclerosis Journal, 21, 485-485. Retrieved from https://doi.org/10.1177/1352458515602642
      • Journal article
        Gagnon, L., Sakadzic, S., Lesage, F., Musacchia, J.J., Lefebvre, J., Fang, Q.Q., Yucel, M.A., Evans, K.C., Mandeville, E.T., Cohen-Adad, J., Polimeni, J.R., Yaseen, M.A., Lo, E.H., Greve, D.N., Buxton, R.B., Dale, A.M., Devor, A. & Boas, D.A. (2015). Quantifying the Microvascular Origin of BOLD-fMRI from First Principles with Two-Photon Microscopy and an Oxygen-Sensitive Nanoprobe. Journal of Neuroscience, 35(8), 3663-3675. Retrieved from https://doi.org/10.1523/jneurosci.3555-14.2015
      • Journal article
        Stikov, N., Campbell, J.S., Stroh, T., Lavelee, M., Frey, S., Novek, J., Nuara, S., Ho, M.K., Bedell, B.J., Dougherty, R.F., Leppert, I.R., Boudreau, M., Narayanan, S., Duval, T., Cohen-Adad, J., Picard, P.A., Gasecka, A., Cote, D. & Pike, G.B. (2015). Quantitative analysis of the myelin g-ratio from electron microscopy images of the macaque corpus callosum. Data in Brief, 4, 368-73. Retrieved from https://doi.org/10.1016/j.dib.2015.05.019
      • Journal article
        Cabana, J.F., Ye, G., Boudreau, M., Levesque, I.R., Atchia, Y., Sled, J.G., Narayanan, S., Arnold, D.L., Pike, G.B., Cohen-Adad, J., Duval, T., Manh-Tung, V. & Stikov, N. (2015). Quantitative magnetization transfer imaging made easy with qMTLab: software for data simulation, analysis, and visualization. Concepts in Magnetic Resonance, Part A (Bridging Education and Research), 44A(5), 263-277. Retrieved from https://doi.org/10.1002/cmr.a.21357
      • Journal article
        Eichner, C., Cauley, S.F., Cohen-Adad, J., Moller, H.E., Turner, R., Setsompop, K. & Wald, L.L. (2015). Real diffusion-weighted MRI enabling true signal averaging and increased diffusion contrast. Neuroimage, 122, 373-384. Retrieved from https://doi.org/10.1016/j.neuroimage.2015.07.074
      • Journal article
        Govindarajan, S.T., Cohen-Adad, J., Sormani, M.P., Fan, A.P., Louapre, C. & Mainero, C. (2015). Reproducibility of T-2* mapping in the human cerebral cortex in vivo at 7 tesla MRI. Journal of Magnetic Resonance Imaging, 42(2), 290-296. Retrieved from https://doi.org/10.1002/jmri.24789
      • Journal article
        Vahdat, S., Lungu, O., Cohen-Adad, J., Marchand-Pauvert, V., Benali, H. & Doyon, J. (2015). Simultaneous Brain-Cervical Cord fMRI Reveals Intrinsic Spinal Cord Plasticity during Motor Sequence Learning. Plos Biology, 13(6), 25 pages. Retrieved from https://doi.org/10.1371/journal.pbio.1002186
      • Journal article
        Cadotte, A., Cadotte, D.W., Livne, M., Cohen-Adad, J., Fleet, D., Mikulis, D. & Fehlings, M.G. (2015). Spinal Cord Segmentation by One Dimensional Normalized Template Matching: A Novel, Quantitative Technique to Analyze Advanced Magnetic Resonance Imaging Data. Plos One, 10(10), 18 pages. Retrieved from https://doi.org/10.1371/journal.pone.0139323
      • Journal article
        Hendrix, P., Griessenauer, C.J., Cohen-Adad, J., Rajasekaran, S., Cauley, K.A., Shoja, M.M., Pezeshk, P. & Tubbs, R.S. (2015). Spinal diffusion tensor imaging: A comprehensive review with emphasis on spinal cord anatomy and clinical applications. Clinical Anatomy, 28(1), 88-95. Retrieved from https://doi.org/10.1002/ca.22349
      • Journal article
        Huang, S.Y., Nummenmaa, A., Witzel, T., Duval, T., Cohen-Adad, J., Wald, L.L. & McNab, J.A. (2015). The impact of gradient strength on in vivo diffusion MRI estimates of axon diameter. Neuroimage, 106, 464-472. Retrieved from https://doi.org/10.1016/j.neuroimage.2014.12.008
      • Journal article
        El Mendili, M.M., Chen, R., Tiret, B., Pelegrini-Issac, M., Cohen-Adad, J., Lehericy, S., Pradat, P.F. & Benali, H. (2015). Validation of a semiautomated spinal cord segmentation method. Journal of Magnetic Resonance Imaging, 41(2), 454-459. Retrieved from https://doi.org/10.1002/jmri.24571
      • Journal article
        Levy, S., Benhamou, M., Naaman, C., Rainville, P., Callot, V. & Cohen-Adad, J. (2015). White matter atlas of the human spinal cord with estimation of partial volume effect. Neuroimage, 119, 262-271. Retrieved from https://doi.org/10.1016/j.neuroimage.2015.06.040
    • 2014
      • Journal article
        Ullmann, E., Pelletier Paquette, J.F., Thong, W.E. & Cohen-Adad, J. (2014). Automatic labeling of vertebral levels using a robust template-based approach. International Journal of Biomedical Imaging, 2014, 9 pages. Retrieved from https://doi.org/10.1155/2014/719520
      • Journal article
        Verma, T. & Cohen‐Adad, J. (2014). Effect of respiration on the B0 field in the human spinal cord at 3T. Magnetic Resonance in Medicine, 72(6), 1629-1636. Retrieved from https://doi.org/10.1002/mrm.25075
      • Journal article
        Fonov, V., Le Troter, A., Taso, M., De Leener, B., Lévêque, G., Benhamou, M., Sdika, M., Benali, H., Pradat, P.-F., Collins, D., Callot, V. & Cohen-Adad, J. (2014). Framework for integrated MRI average of the spinal cord white and gray matter: The MNI-Poly-AMU template. NeuroImage, 102, 817-827. Retrieved from https://doi.org/10.1016/j.neuroimage.2014.08.057
      • Journal article
        El Mendili, M.-M., Cohen-Adad, J., Pelegrini-Issac, M., Rossignol, S., Morizot-Koutlidis, R., Marchand-Pauvert, V., Iglesias, C., Sangari, S., Katz, R., Lehericy, S., Benali, H. & Pradat, P.-F. (2014). Multi-parametric spinal cord MRI as potential progression marker in amyotrophic lateral sclerosis. Plos One, 9(4). Retrieved from https://doi.org/10.1371/journal.pone.0095516
      • Journal article
        Zhao, W., Cohen-Adad, J., Polimeni, J.K., Keil, B., Guerin, B., Setsompop, K., Serano, P., Mareyam, A., Hoech, P. & Wald, L.L. (2014). Nineteen-channel receive array and four-channel transmit array coil for cervical spinal cord imaging at 7T. Magnetic Resonance in Medecine, 72(1), 291-300. Retrieved from https://doi.org/10.1002/mrm.24911
      • Journal article
        Cohen-Adad, J., Martinez, M., Delivet-Mongrain, H. & Rossignol, S. (2014). Recovery of locomotion after partial spinal cord lesions in cats: assessment using behavioral, electrophysiological and imaging techniques. Acta Neurobiologiae Experimentalis, 74, 142-157.
      • Journal article
        Wheeler-Kingshott, C.A.M.G., Stroman, P.W., Schwab, J.M., Bacon, M., Bosma, R., Brooks, J., Cadotte, D.W., Carlstedt, T., Ciccarelli, O., Cohen-Adad, J., Curt, A., Evangelou, N., Fehlings, M.G., Filippi, M., Kelley, B.J., Kollias, S., Mackay, A., Porro, C.A., Smith, S., Strittmatter, S.M., Summers, P., Thompson, A.J. & Tracey, I. (2014). The current state-of-the-art of spinal cord imaging: Applications. Neuroimage, 84, 1082-1093. Retrieved from https://doi.org/10.1016/j.neuroimage.2013.07.014
      • Journal article
        Stroman, P.W., Wheeler-Kingshott, C.A.M.G., Bacon, M., Schwab, J.M., Bosma, R., Brooks, J., Cadotte, D., Carlstedt, T., Ciccarelli, O., Cohen-Adad, J., Curt, A., Evangelou, N., Fehlings, M.G., Filippi, M., Kelley, B.J., Kollias, S., Mackay, A., Porro, C.A., Smith, S., Strittmatter, S.M., Summers, P. & Tracey, I. (2014). The current state-of-the-art of spinal cord imaging: Methods. Neuroimage, 84, 1070-1081. Retrieved from https://doi.org/10.1016/j.neuroimage.2013.04.124
    • 2013
      • Journal article
        Lundell, H., Barthelemy, D., Biering-Sørensen, F., Cohen-Adad, J., Nielsen, J.B. & Dyrby, T.B. (2013). Fast diffusion tensor imaging and tractography of the whole cervical spinal cord using point spread function corrected echo planar imaging. Magnetic Resonance in Medecine, 69(1), 144-149. Retrieved from https://doi.org/10.1002/mrm.24235
      • Journal article
        Satpute, A., Wager, T., Cohen-Adad, J., Bianciardi, M., Choi, J.-K., Buhle, J., Wald, L.L. & Fedman Barret, L. (2013). Identification of discrete functional subregions of the human periaqueductal gray. PNAS, 110(42), 17101-17106. Retrieved from https://doi.org/10.1073/pnas.1306095110
      • Journal article
        Cohen-Adad, J., El Mendili, M.M., Morizot-Koutlidis, R., Lehericy, S., Meininger, V., Blancho, S., Rossignol, S., Benali, H. & Pradat, P.F. (2013). Involvement of spinal sensory pathway in Als and specificity of cord atrophy to lower motor neuron degeneration. Amyotrophic Lateral Sclerosis and Frontotemporal Degeneration, 14(1), 30-38. Retrieved from https://doi.org/10.3109/17482968.2012.701308
      • Journal article
        Setsompop, K., Kimmlingen, R., Eberlein, E., Witzel, T., Cohen-Adad, J., McNab, J.A., Keil, B., Tisdall, M.D., Hoecht, P., Dietz, P., Cauley, S.F., Tountcheva, V., Matschl, V., Lenz, H., Bhat, H., Heberlein, K., Potthast, A., Thein, H., Van Horn, J.D., Toga, A.W., Schmitt, F., Lehne, D., Rosen, B.R., Wedeen, V.J. & Wald, L.L. (2013). Pushing the limits of in vivo diffusion MRI for the human connectome project. NeuroImage, 80, 220-233. Retrieved from https://doi.org/10.1016/j.neuroimage.2013.05.078
      • Journal article
        Mcnab, J.A., Edlow, B.L., Witzel, T., Huang, S.Y., Bhat, H., Heberlein, K., Feiweier, T., Liu, K.C., Keil, B., Cohen-Adad, J., Tisdall, M.D., Folkerth, R.D., Kinney, H.C. & Wald, L.L. (2013). The human connectome project and beyond: Initial applications of 300 Mt/M gradients. Neuroimage, 80, 234-245. Retrieved from https://doi.org/10.1016/j.neuroimage.2013.05.074
      • Journal article
        Cohen-Adad, J., Zhao, W., Keil, B., Ratai, E.-M., Lawson, R., Dheel, C., Wald, L.L., Rosen, B.R., Cudkowicz, M. & Atassi, N. (2013). 7T MRI of the spinal cord can detect corticospinal tract abnormality in ALS. Muscle Nerve, 47(5), 760-762. Retrieved from https://doi.org/10.1002/mus.23720
      • Journal article
        Cadotte, D.W., Cohen-Adad, J. & Fehlings, M.G. (2013). Visualizing integrative functioning in the human brainstem and spinal cord with spinal fMRI. Clinical Neurosurgery, 60(102-109). Retrieved from https://doi.org/10.1227/01.neu.0000430767.87725.95
    • 2012
      • Journal article
        Cohen-Adad, J., Buchbinder, B. & Oaklander, A.L. (2012). Cervical spinal cord injection of epidural corticosteroids: Comprehensive longitudinal study including multiparametric MRI. Pain, 153(11), 2292-2299. Retrieved from https://doi.org/10.1016/j.pain.2012.07.028
      • Journal article
        Nielsen, A.S., Kinkel, R.P., Tinelli, E., Benner, T., Cohen-Adad, J. & Mainero, C. (2012). Focal cortical lesion detection in multiple sclerosis: 3 tesla DIR versus 7 tesla FLASH-T2*. JMRI, 35(3), 537-542. Retrieved from https://doi.org/10.1002/jmri.22847
      • Journal article
        Setsompop, K., Cohen-Adad, J., Gagoski, B.A., Raij, T., Yendiki, A., Keil, B., Wedeen, v.J. & Wald, L.L. (2012). Improving diffusion MRI using simultaneous multi-slice echo planar imaging. Neuroimage, 63(1), 569-580. Retrieved from https://doi.org/10.1016/j.neuroimage.2012.06.033
      • Journal article
        Xie, G., Piche, M., Khoshnejad, M., Perlbarg, V., Chen, J.I., Hoge, R.D., Benali, H., Rossignol, S., Rainville, P. & Cohen-Adad, J. (2012). Reduction of physiological noise with independent component analysis improves the detection of nociceptive responses with fMRI of the human spinal cord. Neuroimage, 63(1), 245-252. Retrieved from https://doi.org/10.1016/j.neuroimage.2012.06.057
      • Journal article
        Cohen-Adad, J., Polimeni, J.R., Helmer, K.G., Benner, T., McNab, J.A., Wald, L.L., Rosen, B. & Mainero, C. (2012). T2* mapping and BO orientation-dependence at 7T reveal cyto- and myeloarchitecture organization of the human cortex. Neuroimage, 60, 1006-1014. Retrieved from https://doi.org/10.1016/j.neuroimage.2012.01.053
    • 2011
      • Journal article
        Cohen-Adad, J., Mareyam, A., Keil, B., Polimeni, J.R. & Wald, L.L. (2011). 32-Channel RF coil optimized for brain and cervical spinal cord at 3 T. Magnetic Resonance Imaging, 66(4), 1198-1208. Retrieved from https://doi.org/10.1002/mrm.22906
      • Journal article
        Cohen-Adad, J., El Mendili, M.M., Lehéricy, S., Pradat, P.F., Blancho, S., Rossignol, S. & Benali, H. (2011). Demyelination and degeneration in the injured human spinal cord detected with diffusion and magnetization transfer MRI. NeuroImage, 55(3), 1024-1033. Retrieved from https://doi.org/10.1016/j.neuroimage.2010.11.089
      • Journal article
        Sharman, M.A., Cohen-Adad, J., Descoteaux, M., Messé, A., Benali, H. & Lehericy, S. (2011). Impact of outliers on diffusion tensor and Q-ball imaging: Clinical implications and correction strategies. JRMI, 33(6), 1491-1502. Retrieved from https://doi.org/10.1002/jmri.22577
      • Journal article
        Cohen-Adad, J., Benner, T., Greve, D., Kinkel, R.P., Radding, A., Fischl, B., Rosen, B.R. & Mainero, C. (2011). In vivo evidence of disseminated subpial T2* signal changes in multiple sclerosis at 7T: A surface-based analysis. NeuroImage, 57(1), 55-62. Retrieved from https://doi.org/10.1016/j.neuroimage.2011.04.009
      • Journal article
        Cohen-Adad, J., Descoteaux, M. & Wald, L.L. (2011). Quality assessment of high angular resolution diffusion imaging data using bootstrap on Q-ball reconstruction. JMRI, 33(5), 1194-1208. Retrieved from https://doi.org/10.1002/jmri.22535
      • Journal article
        Cohen-Adad, J., Leblond, H., Delivet-Mongrain, H., Martinez, M., Benali, H. & Rossignol, S. (2011). Wallerian degeneration after spinal cord lesions in cats detected with diffusion tensor imaging. NeuroImage, 57(3), 1068-1076. Retrieved from https://doi.org/10.1016/j.neuroimage.2011.04.068
    • 2010
      • Journal article
        Cohen-Adad, J., Gauthier, C.J., Brooks, J.C.W., Slessarev, M., Han, J., Fisher, J.A., Rossignol, S. & Hoge, R.D. (2010). BOLD signal responses to controlled hypercapnia in human spinal cord. NeuroImage, 50(3), 1074-1084. Retrieved from https://doi.org/10.1016/j.neuroimage.2009.12.122
      • Journal article
        Brieu, N., Beaumont, E., Dubeau, S., Cohen-Adad, J. & Lesage, F. (2010). Characterization of the hemodynamic response in the rat lumbar spinal cord using intrinsic optical imaging and laser speckle. Journal of Neuroscience Methods, 191(2), 151-157. Retrieved from https://doi.org/10.1016/j.jneumeth.2010.06.012
      • Journal article
        Onu, M., Gervai, P., Cohen-Adad, J., Lawrence, J., Kornelsen, J., Tomanek, B. & Sboto-Frankenstein, U.N. (2010). Human cervical spinal cord funiculi: Investigation with magnetic resonance diffusion tensor imaging. JMRI, 31(4), 829-837. Retrieved from https://doi.org/10.1002/jmri.22101
    • 2009
      • Journal article
        Piché, M., Cohen-Adad, J., Nejad, M.K., Perlbarg, V., Xie, G., Beaudoin, G., Benali, H. & Rainville, P. (2009). Characterization of cardiac-related noise in fMRI of the cervical spinal cord. Magnetic Resonance Imaging, 27(3), 300-310. Retrieved from https://doi.org/10.1016/j.mri.2008.07.019
      • Journal article
        Cohen-Adad, J., Hoge, R.D., Leblond, H., Xie, G., Beaudoin, G., Song, A.W., Krueger, G., Doyon, J., Benali, H. & Rossignol, S. (2009). Investigations on spinal cord fMRI of cats under ketamine. NeuroImage, 44(2), 328-339. Retrieved from https://doi.org/10.1016/j.neuroimage.2008.09.023
    • 2008
      • Journal article
        Cohen-Adad, J., Descoteaux, M., Rossignol, S., Hoge, R.D., Deriche, R. & Benali, H. (2008). Detection of multiple pathways in the spinal cord using q-ball imaging. NeuroImage, 42(2), 739-749. Retrieved from https://doi.org/10.1016/j.neuroimage.2008.04.243
      • Journal article
        Cohen-Adad, J., Benali, H., Barrière, G., Leblond, H., Hoge, R.D. & Rossignol, S. (2008). Development of clinical diffusion tensor MRI of the spinal cord in a context of spincal cord injury [Développement clinique de l'IRM du tenseur de diffusion de la moelle épinière dans un contexte de lésion médullaire]. IRBM, 29(4), 255-260. Retrieved from https://doi.org/10.1016/j.rbmret.2007.12.012
      • Journal article
        Cohen-Adad, J., Benali, H., Hoge, R.D. & Rossignol, S. (2008). In vivo DTI of the healthy and injured cat spinal cord at high spatial and angular resolution. NeuroImage, 40(2), 685-697. Retrieved from https://doi.org/10.1016/j.neuroimage.2007.11.031
    • 2007
      • Journal article
        Cohen-Adad, J., Chapuisat, S., Doyon, J., Rossignol, S., Lina, J.M., Benali, H. & Lesage, F. (2007). Activation detection in diffuse optical imaging by means of the general linear model. Medical Image Analysis, 11(6), 616-629. Retrieved from https://doi.org/10.1016/j.media.2007.06.002
  • Conference papers (220)
    • 2022
      • Conference paper
        Querin, G., Saracino, D., Rinaldi, D., Salachas, F., Marchand-Pauvert, V., Cohen-Adad, J., Le Ber, I. & Pradat, P. (2022). Cervical spinal cord MRI parameters as predictors of early degeneration in asymptomatic C9Orf72 carriers: a longitudinal study [Poster]. Paper presented at the 27th International Congress of the World Muscle Society, Halifax, Nova Scotia, Canada. (Published in Neuromuscular Disorders, 32(Supplement 1), S134-S135). Retrieved from https://doi.org/10.1016/j.nmd.2022.07.385
      • Conference paper
        Azad, R., Heidari, M., Cohen-Adad, J., Adeli, E. & Merhof, D. (2022). Intervertebral Disc Labeling withLearning Shape Information, aLook onceApproach. Paper presented at the 5th International Workshop on Predictive Intelligence in Medicine (PRIME 2022), En ligne / Online (pp. 49-59). Retrieved from https://doi.org/10.1007/978-3-031-16919-9_5
      • Conference paper
        Rangaprakash, G., Guerin, B., Stockmann, J.P., May, M.W., Lopez Rios, N., Gilbert, K.M., Chang, Y., Wald, L.L., Cohen-Adad, J., Keil, B. & Barry, R.L. (2022). Performance characterization of three coils for whole brain and/or cervical spinal cord MRI at 7T [Poster]. Presented at the 2022 Joint annual meeting ISMRM-ESMRMB & ISMRT 31st annual meeting, London, England.
      • Conference paper
        Papp, D., D'Astous, A., Cohen-Adad, J. & Alonso Ortiz, E. (2022). Realtime dynamic xyz-shimming in the cervical spinal cord [Poster]. Presented at the 2022 Joint annual meeting ISMRM-ESMRMB & ISMRT 31st annual meeting, London, England.
      • Conference paper
        Snoussi, H., Combes, B., Commowick, O., Bannier, E., Kerbrat, A., Cohen-Adad, J., Barillot, C. & Caruyer, E. (2022). Reproducibility and Evolution of Diffusion Mri Measurements Within the Cervical Spinal Cord in Multiple Sclerosis. Paper presented at the 19th IEEE International Symposium on Biomedical Imaging (ISBI 2022), Kolkata, India (5 pages). Retrieved from https://doi.org/10.1109/ISBI52829.2022.9761680
    • 2021
      • Conference paper
        Lemay, A., Gros, C., Vincent, O., Liu, Y., Cohen, J.P. & Cohen-Adad, J. (2021). Benefits of linear conditioning for segmentation using metadata. Paper presented at the 4th Conference on Medical Imaging with Deep Learning (CMDL 2021), Lubeck, Germany (pp. 416-430). Retrieved from https://2021.midl.io/papers/a9
      • Conference paper
        Fratini, M., Moraschi, M., Maugeri, L., Tommasin, S., DiNuzzo, M., Cohen-Adad, J., Magini, F., Mascali, D. & Giove, F. (2021). Development of an optimized approach to spinal cord fMRI based on the combinaitionof an ad hoc acquisition method and data analysis [Poster]. Presented at the 2021 Joint annual meeting ISMRM & ISMRT, En ligne / Online.
      • Conference paper
        Vallotton, K., David, G., Curt, A., Fehlings, M., Wheeler-Kingshott, C.A.M.G., Samson, R.S., Cohen-Adad, J., Akbar, M.A., Freund, P. & Seif, M. (2021). Free water eliminated white matter tract integrity of spinal cord in multiple sclerosis and neuromyelitis optica spectrum disorder [Poster]. Presented at the 2021 Joint annual meeting ISMRM & ISMRT, En ligne / Online.
      • Conference paper
        Hori, M., Kamiya, K., Hagiwara, A., Yokoyama, K., Fukunaga, I., Sano, K., Kamagata, K., Murata, K., Fujita, S., Andica, C., Wada, A., Cohen-Adad, J. & Aoki, S. (2021). Spinal cord neurodegeneration rostral and caudal to a degenerative cervical myelopathy (DCM) : a quantitative MRI study [Poster]. Presented at the 2021 Joint annual meeting ISMRM & ISMRT, En ligne / Online.
      • Conference paper
        Azad, R., Rouhier, L. & Cohen-Adad, J. (2021). Stacked Hourglass Network with a Multi-level Attention Mechanism: Where to Look for Intervertebral Disc Labeling. Paper presented at the 12th International Workshop on Machine Learning in Medical Imaging (MLMI 2021) (pp. 406-415). Retrieved from https://doi.org/10.1007/978-3-030-87589-3_42
      • Conference paper
        Valosek, J. & Cohen-Adad, J. (2021). Variations of quantitative MRI metrics along the cervical spinal cord : multi-vendor, multi-center, multi-subject study [Oral presentation]. Presented at the 2021 Joint annual meeting ISMRM & ISMRT, En ligne / Online.
    • 2020
      • Conference paper
        Vincent, O., Gros, C., Cohen, J.P. & Cohen-Adad, J. (2020). Automatic segmentation of spinal MS lesions: How to generalize across MR contrasts? Paper presented at the 26th OHBM annual meeting, En ligne / Online.
      • Conference paper
        Shahrampour, S., De Leener, B., Middleton, D., Alizadeh, M., Krisa, L., Flanders, A., Faro, S., Cohen-Adad, J. & Mohamed, F. (2020). Development of pediatric spinal cord white matter atlas : preliminary analysis [Oral presentation]. Presented at the 2020 Joint annual meeting ISMRM & ISMRT, En ligne / Online.
      • Conference paper
        Shahrampour, S., De Leener, B., Middleton, D., Alizadeh, M., Krisa, L., Flanders, A., Faro, S., Cohen-Adad, J. & Mohamed, F. (2020). Development of pediatric spinal cord white matter atlas : preliminary analysis [Poster]. Presented at the 58th ASNR annual meeting, En ligne / Online.
      • Conference paper
        De Leener, B., Soltrand Dahlberg, L., Khatibi, A., Cohen-Adad, J. & Doyon, J. (2020). Effect of non-protonated perfluorocarbon liquid-filled SatPads on spinal cord MRI imaging [Oral presentation]. Presented at the 2020 Joint annual meeting ISMRM & ISMRT, En ligne / Online.
      • Conference paper
        Gros, C., Asiri, A., De Leener, B., Watson, C., Cowin, G., Ruitenberg, M., Kurniawan, N. & Cohen-Adad, J. (2020). Ex vivo MRI template of the human cervical cord at 80μm isotropic resolution [Oral presentation]. Presented at the 2020 Joint annual meeting ISMRM & ISMRT, En ligne / Online.
      • Conference paper
        Nestrasil, I., Labounek, R., Nguyen, C., Krasovec, I., Valosek, J., Svatkova, A., Cohen-Adad, J., Lenglet, C. & Whitley, C. (2020). Intraspinal space restriction at the occipito-cervical junction alters cervical spinal cord diffusion MRI metrics in mucopolysacharidoses patients [Abstract]. Paper presented at the 16th Annual Research Meeting of the WORLDSymposium, Orlando, Florida. (Published in Molecular Genetics and Metabolism, 129(2), S115). Retrieved from https://doi.org/10.1016/j.ymgme.2019.11.297
      • Conference paper
        Mancini, M., Alonso Ortiz, E., Cercignani, M., Cohen-Adad, J. & Stikov, N. (2020). Myelin-sensitive quantitative maps : two's company, three's a crowd? Paper presented at the ISMRM & SMRT annual Meeting & Exhibition (ISMRM 2020). Retrieved from https://archive.ismrm.org/2020/1010.html
      • Conference paper
        Enguix, V., Ding, Y., Luck, D., Cohen-Adad, J. & Lodygensky, G. (2020). Neonatal functional connectivity MRI preprocessing toolbox. Paper presented at the 26th OHBM annual meeting, En ligne / Online.
      • Conference paper
        Alonso Ortiz, E., Gros, C., Foias, A., Abramovic, M., Ameitz, C., Atcheson, N., Barlow, L., Barry, R.L., Barth, M., Battiston, M., Buchel, C., Budde, M., Callot, V., De Leener, B., Descoteaux, M., De Sousa, P.L., Dostal, M., Doyon, J., Dvorak, A., Eippert, F., Epperson, K.R., Epperson, K.S., Finsterbusch, J., Fukunaga, I., Wheeler-Kingshott, C.A.M.G., Germani, G., Gilbert, G., Grussu, F., Hagiwara, A., Henry, P.-G., Horák, T., Hori, M., Joers, J., Kamiya, K., Karbasforoushan, H., Khatibi, A., Kim, J.W., Kinany, N., Kitzler, H.H., Kolind, S., Kong, Y., Kudlička, P., Kuntke, P., Kurniawan, N.D., Kusmia, S., Labounek, R., Laganà, M.M., Laule, C., Law, C.S., Lenglet, C., Leutritz, T., Liu, Y., Llufriu, S., Mackey, S., Martinez-Heras, E., Nestrasil, I., Papinutto, N., Papp, D., Pareto, D., Parrish, T.B., Pichiecchio, A., Rovira, À., Ruitenberg, M.J., Samson, R.S., Savini, G., Seif, M., Seifert, A.C., Smith, A.K., Smith, Z.A., Solana, E., Suzuki, Y., Tackley, G., Tinnermann, A., Valošek, J., Yiannakas, M.C., Weber II, K.A., Weiskopf, N., Wise, R., Wyss, P.O., Xu, J. & Cohen-Adad, J. (2020). Quantitative MRI of the spinal cord : reproducibility and normative values across 40 sites. Paper presented at the ISMRM & SMRT annual Meeting & Exhibition (ISMRM 2020). Retrieved from https://archive.ismrm.org/2020/1170.html
      • Conference paper
        Alonso Ortiz, E., Tous, C., Topfer, R. & Cohen-Adad, J. (2020). Real-time z-shimming for magnetic resonance imaging of the spinal cord. Paper presented at the ISMRM & SMRT annual Meeting & Exhibition (ISMRM 2020). Retrieved from https://archive.ismrm.org/2020/3717.html
      • Conference paper
        Mangeat, G., Ouellette, R., Platten, M., Petersson, S., Van Loo, H., Badji, A., Stikov, N., Cohen-Adad, J. & Granberg, T. (2020). Repeatability and reproducibility of quantitative synthetic MRI across vendors and field strengths. Paper presented at the 26th OHBM annual meeting, En ligne / Online.
      • Conference paper
        Samson, R.S., Stutters, J., Akbar, M.A., Curt, A., Cohen-Adad, J., Fehlings, M., Freund, P., Innerarity, B., Seif, M., Tur, C. & Gandini Wheeler-Kingshott, C.A.M. (2020). Spinal cord and brain DTI alterations in cervical spondylotic myelopathy (CSM) [Oral presentation]. Presented at the 2020 Joint annual meeting ISMRM & ISMRT, En ligne / Online.
      • Conference paper
        Querin, G., Bede, P., El Mendili, M., Pellegrini-Issac, M., Rinaldi, D., Catala, M., Saracino, D., Salachas, F., Camuzat, A., Marchand-Pauvert, V., Cohen-Adad, J., Colliot, O., Le Ber, I. & Pradat, P. (2020). Spinal cord MRI for early detection of presymptomatic pathology in c9orf72 mutation carriers: A longitudinal neuroimaging study [Abstract]. Paper presented at the 25th International Congress of the World-Muscle-Society (WMS 2020). (Published in Neuromuscular Disorders, 30(1 (supplement)), 1 page). Retrieved from https://doi.org/10.1016/j.nmd.2020.08.346
      • Conference paper
        Querin, G., Bede, P., Mendili, M.M.E., Pellegrini-Issac, M., Rinaldi, D., Saracino, D., Salachas, F., Camuzat, A., Marchand-Pauvert, V., Cohen-Adad, J., Colliot, O., Le Ber, I., Pradat, P.F. & Catala, M. (2020). Spinal cord MRI for early detection of presymptomatic pathology in C9orf72 mutation carriers: a three time-points longitudinal MRI study [Abstract]. Paper presented at the 6th Congress of the European-Academy-of-Neurology (EAN 2020), Virtual. (Published in European Journal of Neurology, 27(S1), 69-69). Retrieved from https://doi.org/10.1111/ene.14306
      • Conference paper
        Lemay, A., Gros, C., Zhuo, Z., Duan, Y., Zhang, J., Cohen-Adad, J. & Liu, Y. (2020). Spinal cord tumor segmentation using multimodal deep learning approach. Paper presented at the 26th OHBM annual meeting, En ligne / Online.
      • Conference paper
        Rouhier, L., Cohen, J.P., Perdigon Romero, F. & Cohen-Adad, J. (2020). Spine inter vertebral disc labeling using a fully convolutional redundant counting model. Paper presented at the 26th OHBM annual meeting, En ligne / Online.
      • Conference paper
        Boyle, J.A., Pinsard, B., Boukhdhir, A., Belleville, S., Brambatti, S., Chen, J., Cohen-Adad, J., Cyr, A., Fuente, A., Rainville, P. & P., B. (2020). The courtois project on neuronal modelling - first data release. Paper presented at the 26th OHBM annual meeting, En ligne / Online.
      • Conference paper
        Karakuzu, A., Boudreau, M., Cohen-Adad, J. & Stikov, N. (2020). Thinking outside the black box : a fully transparent T1 mapping pipelline [Poster]. Presented at the 2020 Joint annual meeting ISMRM & ISMRT.
    • 2019
      • Conference paper
        Hori, M., Hagiwara, A., Yokoyama, K., Kamiya, K., Funkunaga, I., Maekawa, T., Kamagata, K., Murata, K., Fujita, S., Irie, R., Andicca, C., Kumamaru, K., Wada, A., Cohen-Adad, J. & Aoki, S. (2019). Application of spinal cord white matter tract integrity quantification with atlas-based analysi in multiple sclerosis and neuromyelitis optica spectrum disorder. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/3629.html
      • Conference paper
        Badji, A., De la Colina, A.N., Karakuzu, A., Duval, T., Desjardins-Crépeau, L., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N., Cohen-Adad, J. & Girouard, H. (2019). Approches en imagerie par résonance magnétique pour l'étude de l'impact de la rigidité artérielle sur la matière blanche du cerveau chez les personnes âgées. Paper presented at the 27e Congrès scientifique annuel de la Société québécoise d'hypertension artérielle, Québec, Qc.
      • Conference paper
        Badji, A., Noriega de la Colina, A., Karakuzu, A., Duval, T., Desjardins-Crépeau, L., Joubert, S., Bherer, L., Lamarre-Cliche, M., Stikov, N. & Cohen-Adad, J. (2019). Arterial stiffness and white matter integrity in the elderly : a diffusion tensor and magnetization transfer imaging study [Poster]. Presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/0335.html
      • Conference paper
        Badji, A., de la Colina, A.N., Sabra, D., Karakuzu, A., Bherer, L., Lamarre-Cliche, M., Stikov, N., Gauthier, C., Cohen-Adad, J. & Girouard, H. (2019). Arterial stiffness, cerebral blood flow and white matter integrity in the elderly: an arterial spin labelling and Neurite orientation dispersion and density study [Abstract]. Paper presented at the 29th International Symposium on Cerebral Blood Flow, Metabolism and Function / 14th International Conference on Quantification of Brain Function with PET (BRAIN 2019 and BRAIN Pet 2019), Yokohama, JAPAN. (Published in Journal of Cerebral Blood Flow and Metabolism, 39, 323-324). Retrieved from https://doi.org/10.1177/0271678X19851020
      • Conference paper
        de la Colina, A.N., Badji, A., Sabra, D., Karakuzu, A., Joubert, S., Bherer, L., Lamarre-Cliche, M., Gauthier, C., Cohen-Adad, J. & Girouard, H. (2019). Augmentation index is a predictor of cerebral blood flow across global grey matter in the elderly [Abstract]. Paper presented at the 29th International Symposium on Cerebral Blood Flow, Metabolism and Function / 14th International Conference on Quantification of Brain Function with PET (BRAIN 2019 and BRAIN Pet 2019), Yokohama, JAPAN. (Published in Journal of Cerebral Blood Flow and Metabolism, 39, 134-135). Retrieved from https://doi.org/10.1177%2F0271678X19851017
      • Conference paper
        Nestrasil, I., Labounek, R., Nguyen, C., Krasovec, I., Valosek, J., Svatkova, A., Cohen-Adad, J., Lenglet, C. & Whitley, C. (2019). Cervical spinal cord diffusion MRI and intraspinal space restriction at the occipito-cervical junction in muccopolysacharidoses patients [Poster]. Presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/0302.html
      • Conference paper
        Lousada, E., Boudreau, M., Perone, C., Cohen-Adad, J., Nait-Oumesmar, B., Schreiweis, C. & Burguière, E. (2019). Characterization of cortico-striatal myelination in the cortex of pathological repetitive behaviors [Abstract]. Presented at the 13th IBAGS Meeting, Biarritz, France.
      • Conference paper
        Ouellette, R., Treaba, C.A., Granberg, T., Herranz, E., Barletta, V., Mehndiratta, A., De Leener, B., Tauhid, S., Yousuf, F., Dupont, S., Klawiter, E.C., Sloane, J.A., Bakshi, R., Cohen-Adad, J. & Mainero, C. (2019). Characterization of outer and inner spinal cord pathology in multiple sclerosis by 7 Tesla imaging [Abstract]. Paper presented at the 35th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS) and 24th Annual Conference of Rehabilitation in MS, Stockholm, Sweden. (Published in Multiple Sclerosis Journal, 25, 681-682). Retrieved from https://doi.org/10.1177/1352458519868081
      • Conference paper
        Nami, H., Saliani, A., Zaimi, A., Duval, T., Perone, C., Stikov, N. & Cohen-Adad, J. (2019). Construction of a quantifiable rat spinal cord atlas and tract delineation using agglomerative clustering [Poster]. Presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/0306.html
      • Conference paper
        Rouhier, L., Parizet, M., Ali Akbar, M., Weber, M., Fehlings, M. & Cohen-Adad, J. (2019). Deep learning for prognosis in degenerative cervical myelopathy. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/3086.html
      • Conference paper
        Shahrampour, S., De Leener, B., Middleton, D., Jonnavithula, K., Alizadeh, M., Pediyakkal, H., Krisa, L., Flanders, A., Faro, S., Cohen-Adad, J. & Mohamed, F. (2019). Development of a standardized normative pediatric spinal cord structural template : demonstration of an automatic estimation of spinal cord cross sectional area measurements (SCCSA). Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/2624.html
      • Conference paper
        Shahrampour, S., De Leener, B., Middleton, D., Jonnavithula, K., Alizadeh, M., Pediyakkal, H., Krisa, L., Flanders, A., Faro, S., Cohen-Adad, J. & Mohamed, F. (2019). Development of a standardized normative pediatric spinal cord structural template : demonstration of an automatic estimation of spinal cord cross sectional area measurements (SCCSA) [Oral presentation]. Presented at the 57th ASNR Annual Meeting, Boston, MA, USA.
      • Conference paper
        AskariHemmat Hossein, M., Savaria, Y., Jean-Pierre, D., Honari, S., Perone, C., Rouhier, L. & Cohen-Adad, J. (2019). Fixed-point u-net quantization for medical image segmentation. Paper presented at the 22nd International Conference on Medical Image Computing & Computer Assisted Intervention (MICCAI 2019), Shenzhen, China.
      • Conference paper
        Snoussi, H., Caruyer, E., Cohen-Adad, J., Commowick, O., Combès, B., Bannier, E., Anne, K. & Barillot, C. (2019). Geometric evaluation of distortion correction methods in diffusion MRI of the spinal cord. Paper presented at the IEEE International Symposium on Biomedical Imaging (ISBI 2019), Venice, Italy. Retrieved from https://doi.org/10.1109/ISBI.2019.8759196
      • Conference paper
        Lopez Rios, N., Topfer, R., Foias, A., Guittonneau, A., Gilbert, K., Menon, R., Wald, L.L., Stockmann, J. & Cohen-Adad, J. (2019). Integrated AC/DC coil dipole Tx array for 7T MRI of the spinal cord [Poster]. Presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/0220.html
      • Conference paper
        Samson, R.S., Stutters, J., Ali Akbar, M., Cohen-Adad, J., Curt, A., Fehlings, M., Freund, P., Seif, M. & Wheeler-Kingshott, C.A.M.G. (2019). Investigation of DTI parameters in the corticospinal tract : from cervical cord to motor cortex. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/2885.html
      • Conference paper
        Barletta, V., Herranz, E., Treaba, A., Mehndiratta, A., Ouellette, R., Mangeat, G., Sloane, J., Mercaldo, N., Cohen-Adad, J. & Mainero, C. (2019). In vivo characterization of cortical lesion demyelination and remyelination in early multiple sclerosis by quantitative 7 Tesla MRI [Abstract]. Paper presented at the 35th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS 2019) and 24th Annual Conference of Rehabilitation in MS, Stockholm, Sweden. (Published in Multiple Sclerosis Journal, 25(S2), 124). Retrieved from https://doi.org/10.1177/1352458519868070
      • Conference paper
        Kerbrat, A., Gros, C., Badji, A., Bannier, E., Combes, B., Galassi, F., Labauge, P., Ayrignac, X., Dalliere, C.C., Pinna, F., De Leener, B., Eden, D., Maranzano, J., Zhuoquiong, R., Granberg, T., Stawiarz, L., Hillert, J., Ouellette, R., Talbott, J., Tachibana, Y., Hori, M., Kamiya, K., Chougar, L., Lefeuvre, J., Reich, D., Nair, G., Valsasina, P., Rocca, M., Filippi, M., Chu, R., Bakshi, R., Edan, G. & Cohen-Adad, J. (2019). Multiple sclerosis lesions in motor tracts from the brain to the cervical cord: spatial distribution and correlation with functional deficits [Abstract]. Paper presented at the 35th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS 2019) and 24th Annual Conference of Rehabilitation in MS, Stockholm, Sweden. (Published in Multiple Sclerosis Journal, 25, 922-923). Retrieved from https://doi.org/10.1177/1352458519869496
      • Conference paper
        Labounek, R., Valosek, J., Horak, T., Bednarik, P., Hok, P., Kulicka, P., Horakova, M., Kocica, J., Lenglet, C., Cohen-Adad, J., Nestrasil, I., Bednarik, J. & Hlustik, P. (2019). Novel HARDI-ZOOMit protocol detects changes in spinal cord microstructure in patients with asymptomatic non-myelopathic degenerative cervical spinal cord compression. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/3532.html
      • Conference paper
        Karakuzu, A., Cohen-Adad, J., Stikov, N. & Yucesoy, C.A. (2019). On the reproducibility of MRI-DTI based passeive lenght changes and the added implications of quantitative MRI [Abstract]. Presented at the 2019 27th ISB Congress and 43rd ASB annual Meeting, Calgary, AB, Canada.
      • Conference paper
        Karakuzu, A., Boudreau, M., Duval, T., Leppert, I.R., Cohen-Adad, J. & Stikov, N. (2019). qMRLab : an open source software project for streaming quantitative magnetic resonance imaging [Abstract]. Presented at the 2019 27th ISB Congress and 43rd ASB annual Meeting, Calgary, AB, Canada.
      • Conference paper
        Topfer, R., Lopez Rios, N., Foias, A., Arango, N., Wald, L.L., Stockmann, J. & Cohen-Adad, J. (2019). Real-time shimming in the cervical spinal cord using an 8-channel AC/DC array and a capacitive respiratory sensor. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/0925.html
      • Conference paper
        Kerbrat, A., Gros, C., Badji, A., Bannier, E., Galassi, F., Combes, B., Labauge, P., Ayrignac, X., Dallière, C., Pinna, F., Leener, B., Maranzano, J., Zhuoquiong, R., Granbert, T., Stawiarz, L., Hillert, J., Ouellette, R., Talbott, J.F., Tachibana, Y., Hori, M., Kamiya, K., Chougar, L., Lefeuvre, J., Reich, D., Nair, G., Valsasina, P., Rocca, M., Filippi, M., Chu, R., Bakshi, R., Edan, G. & Cohen-Adad, J. (2019). Spatial distribution of multiple sclerosis lesions along the brain and spinal motor tracts and correlation with functional deficits. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/3162.html
      • Conference paper
        Mangeat, G., Nami, H., Pinon, N., Foias, A., Stikov, N., Granberg, T. & Cohen-Adad, J. (2019). Stain-free histology to validate quantitative MRI. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/4909.html
      • Conference paper
        Boshkovski, T., Badji, A., Janic, P., Kocarev, L., Cohen-Adad, J., Giorgio, A., De Stefano, N., Misic, B. & Stikov, N. (2019). The myelin-weighted connectome : a new look at multiple sclerosis. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/3314.html
      • Conference paper
        Karakuzu, A., Boudreau, M., Duval, T., Leppert, I.R., Boshkovski, T., Cohen-Adad, J. & Stikov, N. (2019). The qMRLab workflow : form acquisition to publication. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/4832.html
      • Conference paper
        Badji, A., de la Colina, A.N., Sabra, D., Karakuzu, A., Bherer, L., Lamarre-Cliche, M., Stikov, N., Gauthier, C., Cohen-Adad, J. & Girouard, H. (2019). The relationship between cognitive function, cortical blood flow and sub-cortical white-matter health in the elderly [Abstract]. Paper presented at the 29th International Symposium on Cerebral Blood Flow, Metabolism and Function / 14th International Conference on Quantification of Brain Function with PET (BRAIN 2019 and BRAIN Pet 2019), Yokohama, JAPAN. (Published in Journal of Cerebral Blood Flow and Metabolism, 39, 29-30). Retrieved from https://doi.org/10.1177/0271678X19850985
      • Conference paper
        DiNuzzo, M., Cohen-Adad, J., Mangini, F.M., Maugeri, L., Moraschi, M., Mascali, D., Giove, F. & Fratini, M. (2019). Towards a standard pipeline for the analysis of human spinal cord fMRI data series. Paper presented at the ISMRM 27th Annual Meeting & Exhibition, Montréal, Qc. Retrieved from https://index.mirasmart.com/ISMRM2019/PDFfiles/0919.html
    • 2018
      • Conference paper
        Mangeat, G., Ouellette, R., Warntjes, M., Platten, M., Engstrom Nordin, L., Stikov, N., Granberg, T. & Cohen-Adad, J. (2018). Accuracy and precision of synthetic MRI [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/2280.html
      • Conference paper
        Grussu, F., Battiston, M., Veraart, J., Schneider, T., Cohen-Adad, J., Cardoso, M.J., Alexander, D.C., Novikov, D.S., Fieremans, E. & Wheeler-Kingshott, C.A.M.G. (2018). A unified signal readout improves denoising of multi-modal spinal cord MRI. Paper presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/2752.html
      • Conference paper
        Gros, C., Badji, A., Maranzano, J., Zhuoquiong, R., Yao, J., Bannier, E., Kerbrat, A., Edan, G., Labauge, P., Callot, V., Pelletier, J., Audoin, B., Rasoanandrianina, H., Valsasina, P., Filippi, M., Bakshi, R., Tauhid, S., Prados, F., Yiannakas, M.C., Kearney, H., Ciccarelli, O., Narayanan, S. & Cohen-Adad, J. (2018). Automatic MS lesion segmentation in the spinal cord using deep learning [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/0696.html
      • Conference paper
        Ouellette, R., Treaba, C.A., Granberg, T., Barletta, V., Herranz E, T., Mangeat, G., Mehndiratta, A., Tauhid, S., Yousuf, F., De Leener, B., Dupont, S., Sloane, J.A., Bakshi, R., Cohen-Adad, J. & Mainero, C. (2018). Characterization of multiple sclerosis grey and white matter pathology in the brain and spinal cord at 7 Tesla MRI [Poster]. Paper presented at the 34th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS 2018), Berlin, Germany. (Published in Multiple Sclerosis Journal, 24(2), 624). Retrieved from https://doi.org/10.1177/1352458518798591
      • Conference paper
        Ouellette, R., Treaba, C.A., Granberg, T., Barletta, V., Herranz, E., Mangeat, G., Mehndiratta, A., Tauhid, S., Yousuf, F., De Leener, B., Dupont, S., Sloane, J.A., Bakshi, R., Cohen-Adad, J. & Mainero, C. (2018). Characterization of multiple sclerosis grey and white matter pathology in the brain and spinar cord at 7 Tesla MRI. Paper presented at the 34th congress of the European Committee for Treatment and Research in Multiple Sclerosis, Berlin, Germany. Retrieved from https://onlinelibrary.ectrims-congress.eu/ectrims/2018/ectrims-2018/228961/russell.ouellette.characterization.of.multiple.sclerosis.grey.and.white.matter.html
      • Conference paper
        Ouellette, R., Warntjes, M., Forslin, Y., Bergendal, A., Polyak, I., Mangeat, G., Platten, M., Uppman, M., Cohen-Adad, J., Piehl, F., Wiberg, M.K., Fredrikson, S., Mainero, C. & Granberg, T. (2018). Clinical and histological validation of rapid magnetic resonance myelin imaging in multiple sclerosis [Poster]. Paper presented at the 34th Congress of the European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS 2018), Berlin, Germany. (Published in Multiple Sclerosis Journal, 24(2), 409-410). Retrieved from https://doi.org/10.1177/1352458518798590
      • Conference paper
        Samson, R.S., Battiston, M., Seif, M., Cohen-Adad, J., Freund, P. & Wheeler-Kingshott, C.A.M.G. (2018). Comparison of cervical cord results form a quantitative 3D multi-parameter mapping (MPM) protocol of the whole brain with a dedicated cervical cord protocol [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/0671.html
      • Conference paper
        Alley, S., Gilbert, G., Wheeler-Kingshott, C.A.M.G., Samson, R.S., Grussu, F., Martin, A., Bannier, E., Callot, V., Smith, S.A., Xu, J., Dewey, B., Weber, K.A., Parrish, T., McLauren, D., Barker, G.J.P.N., Sief, M., Freund, P., Barry, R.L., By, S. & Cohen-Adad, J. (2018). Consensus acquisition protocol for quantitative MRI of the cervical spinal cord at 3T [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/0799.html
      • Conference paper
        McCoy, D.B., Dupont, S.M., Gros, C., Narvid, J., Cohen-Adad, J. & Talbot, J.F. (2018). Convolutional neural network based segmentation of the spinal cord and intramedullary injury in acute blunt spinal cor trauma [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/0700.html
      • Conference paper
        Lubrano di Scandalea, M., Perone, C.S. & Cohen-Adad, J. (2018). Deep active learning for myelin segmentation of histology data [Oral presentation]. Presented at the 2nd Montréal Artificial Intelligence and Neuroscience Conference (MAIN 2018), Montréal, Qc, Canada.
      • Conference paper
        Perone, C.S. & Cohen-Adad, J. (2018). Deep semi-supervised segmentation with weight-averaged consistency targets. Paper presented at the 4th International Workshop on Deep Learning in Medical Image Analysis (DLMIA 2018) and 8th International Workshop on Multimodal Learning for Clinical Decision Support (ML-CDS 2018), Granada, Spain (pp. 12-19). Retrieved from https://doi.org/10.1007/978-3-030-00889-5_2
      • Conference paper
        Shahrampour, S., De Leener, B., Middleton, D., Jonnavithula, K., Alizadeh, M., Pediyakkal, H., Flanders, A., Faro, S., Cohen-Adad, J. & Mohamed, F. (2018). Development of a standardized normative pediatric spinal cord structural template : demonstration of an automatic estimation of spinal cord corss sectional area measurements (SCCSA). Paper presented at the ASNR 56th annual meeting, Vancouver, CB.
      • Conference paper
        Topfer, R., Foias, A., Lopez Rios, N., Chauffray, A., Germain, G., Arango, N., Wald, L.L., Stockmann, J. & Cohen-Adad, J. (2018). Integrated Bo/Rx coil array for improved spinal cord imaging at 3T [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/0834.html
      • Conference paper
        Mangeat, G., Ouellette, R., Wabartha, M., Karrenbauer, V.D., Stikov, N., Warntjes, M., Mainero, C., Cohen-Adad, J. & Granberg, T. (2018). Machine learning and rapid multi-parametric relaxometry can differentiate demyelinating disorders with high accuracy [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/0899.html
      • Conference paper
        Grussu, F., Veraart, J., Battiston, M., Schneider, T., Cohen-Adad, J., Cardoso, M.H., Wheeler-Kingshott, C.A.M.G., Fieremans, E., Alexander, D.C. & Novikov, D.S. (2018). Magnitude versus complex-valued images for spinal cord diffusion MRI : which one is best? [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/0466.html
      • Conference paper
        Cohen-Adad, J. (2018). Microstructural imaging in the spinal cord and validation strategies. Paper presented at the Workshop on Toward a Super-BigBrain - Promise and Pitfalls of Microstructural Imaging, Montréal, Canada. (Published in Neuroimage, 182, 169-183). Retrieved from https://doi.org/10.1016/j.neuroimage.2018.04.009
      • Conference paper
        Campbell, J.S.W., Leppert, I.R., Narayanan, S., Boudreau, M., Duval, T., Cohen-Adad, J., Pike, G.B. & Stikov, N. (2018). Promise and pitfalls of g-ratio estimation with MRI. Paper presented at the Workshop on Toward a Super-BigBrain - Promise and Pitfalls of Microstructural Imaging, Montréal, Canada. (Published in Neuroimage, 182, 80-96). Retrieved from https://doi.org/10.1016/j.neuroimage.2017.08.038
      • Conference paper
        Duval, T., Leppert, I.R., Cabana, J.F., Boudreau, M., Gagnon, I., Berestovoy, G., Cohen-Adad, J. & Stikov, N. (2018). Quantitative MRI made easy with qMRLab [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/2288.html
      • Conference paper
        Eden, D., Gros, C., Badji, A., Dupont, S., Maranzano, J., Zhuoquiong, R., Yaou, L., Talbott, J., Bannier, E., Kerbrat, A., Edan, G., Labauge, O., Callot, V., Pelletier, J., Audoin, B., Rasoanandrianina, V., Filippi, M., Bakshi, R., Tauhid, S., Prados, F., Yiannakas, M., Kearney, H., Ciccarelli, O., Treaba, C.A., Mainero, C., Ouellette, R., Granberg, T., Narayanan, S. & Cohen-Adad, J. (2018). Spatial distribution of multiple sclerosis in the cervical cord [Poster]. Presented at the Joint annual meeting ISMRM - ESMRMB, Paris, France. Retrieved from https://cds.ismrm.org/protected/18MProceedings/PDFfiles/0082.html
      • Conference paper
        Perdigon Romero, F., David, J.P. & Cohen-Adad, J. (2018). Vertebral labeling on MRI using deep learning techniques [Abstract]. Presented at the NeuroInformatics 2018, Montréal, Qc, Canada. Retrieved from https://space.incf.org/index.php/s/wQiosah6Ul8slk7
      • Conference paper
        Shahrampour, S., De Leener, B., Middleton, D., Flanders, A., Faro, S., Cohen-Adad, J., Alizadeh, M., Krisa, L. & Mohamed, F. (2018). Volumetric analysis of pediatric spinal cord structural MRI data using SCT. Paper presented at the ASNR 56th annual meeting, Vancouver, CB.
    • 2017
      • Conference paper
        Badji, A., Mangeat, G., Ouellette, R., Treaba, C.A., Granberg, T., Herranz, E., Louapre, C., Stikov, N., Sloane, J., Bellec, P., Mainero, C. & Cohen-Adad, J. (2017). Changes in structural network connectivity in early-stage multiple sclerosis are associated with cortical demyelination. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/0020.html
      • Conference paper
        Ouellette, R., Treaba, C.A., Granberg, T., Herranz, E., Barletta, V., De Leener, B., Tauhid, S., Yousuf, F., Dupont, S., Klawiter, E.C., Sloane, J.A., Bakshi, R., Cohen-Adad, J. & Mainero, C. (2017). Characterization of spinal cord pathology and its correlates at ultra-high field MRI. Paper presented at the 7th Joint European-Committee-for-Treatment-and-Research-in-Multiple-Sclerosis (ECTRIMS)-Americas-Committee-for-Treatment-and-Research-in-Multiple-Scle rosis (ACTRIMS), Paris, France. (Published in Multiple Sclerosis Journal, 23, 250-251). Retrieved from https://doi.org/10.1177/1352458517731404
      • Conference paper
        Yu, F., Huang, S.Y., Machado, N., Bireley, J.D., Duval, T., Cohen-Adad, J., Wald, L.L. & Klawiter, E.C. (2017). Evaluation of axonal and myelin integrity with advanced MRI methods in multiple sclerosis. Paper presented at the ASNR 55th annual meeting, Long Beach, California.
      • Conference paper
        Cabana, J.F., Gilbert, G., Stikov, N., Cohen-Adad, J., Létourneau-Guillon, L. & Nguyen, D. (2017). Exploring complementary in multi-modal imaging of cortex microstructure : a diffusion and relaxometry study. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/2405.html
      • Conference paper
        Mangeat, G., De Leener, B., Karrenbauer, V.D., Warntjes, M., Stikov, N., Mainero, C., Cohen-Adad, J. & Granberg, T. (2017). Fast multivariate relaxometry can differentiate neurodegenerative disease processes and phenotypes. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai.
      • Conference paper
        Dupont, S.M., Martin, A.R., Stikov, N., Fehlings, M.G. & Cohen-Adad, J. (2017). Fully automatic segmentation of spinal cord gray matter on patients with degenerative cervical myelopathy [Poster]. Presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/0918.html
      • Conference paper
        Porisky, A., Brosch, T., Ljungberg, E., Tang, L.Y.W., Yoo, Y., De Leener, B., Traboulsee, A., Cohen-Adad, J. & Tam, R. (2017). Grey matter segmentation in spinal cord mris via 3D convolutional encoder networks with shortcut connections. Paper presented at the 3rd International Workshop on Deep Learning in Medical Image Analysis (DLMIA 2017) and 7th International Workshop on Multimodal Learning for Clinical Decision Support (ML-CDS 2017) held in Conjunction with 20th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Québec City, QC, Canada (pp. 330-337). Retrieved from https://doi.org/10.1007/978-3-319-67558-9_38
      • Conference paper
        Ning, L., Duval, T., Cohen-Adad, J. & Rathi, Y. (2017). Histological validation of microstructural measures derived for the PICASSO model. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai.
      • Conference paper
        Granberg, T., Fan, Q., Andrada Treaba, C., Ouellette, R., Herranz, E., Mangeat, G., Louapre, C., Cohen-Adad, J., Klawiter, E., Sloane, J. & Mainero, C. (2017). In vivo characterization of cortical and white matter neuroaxonal pathology in early multiple sclerosis (S2.005). Paper presented at the 69th AAN Annual Meeting, Boston.
      • Conference paper
        Ljungberg, E., Cohen-Adad, J., Eunyoung Lee, L., Rauscher, A., Li, D., Traboulsee, A., Mackay, A., Figley, C., Lee, J. & Kolind, S. (2017). Making myeling water imaging mainstream : multi-site and multi-vendor reproductibility. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/1934.html
      • Conference paper
        Martin, A.R., De Leener, B., Cohen-Adad, J., Cadotte, D.W., Wilson, J.R., Tetreault, L., Lange, S.F., Nouri, A., Crawley, A., Mikulis, D.J., Ginsberg, H. & Michael, F.G. (2017). Multi-parametric cervical spinal cord MRI provides an acurate diagnostic tool for detecting clinical myelopathy [Oral presentation]. Presented at the ISMR 25th annual meeting and Exhibition, Honolulu, HI, USA. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/0917.html
      • Conference paper
        Martin, A.R., De Leener, B., Cohen-Adad, J., Cadotte, D.W., Wilson, J.R., Tetreault, L., Nouri, A., Crawley, A., Mikulis, D.J., Ginsberg, H. & Fehlings, M.G. (2017). Multi-parametric spinal cord MRI detects subclinical tissue injury in asymptomatic cervical spinal cord compression [Poster]. Presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai.
      • Conference paper
        Vuong, M.-T., Duval, T., Cohen-Adad, J. & Stikov, N. (2017). On the precision of myeling imaging : characterizing ex vivo dog spinal cord with MRI and histology. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai.
      • Conference paper
        Gros, C., De Leener, B., Dupont, S.M., Martin, A.R., Fehlings, M.G., Bakshi, R., Tummala, S., Auclair, V., McLaren, D.G., Callot, V., Sdika, M. & Cohen-Adad, J. (2017). OptiC: Robust and automatic spinal cord localization on a large variety of MRI data using a distance transform based global optimization. Paper presented at the 20th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2017), Québec City, QC, Canada (pp. 712-719). Retrieved from https://doi.org/10.1007/978-3-319-66185-8_80
      • Conference paper
        De Leener, B., Fonov, V., Collins, D.L., Callot, V., Stikov, N. & Cohen-Adad, J. (2017). PAM50 : multimodal template of the brainstem and spinal cord compatible with the ICBM152 space [Poster]. Presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/0187.html
      • Conference paper
        Van Assel, C., Mangeat, G., De Leener, B., Stikov, N., Mainero, C. & Cohen-Adad, J. (2017). Partial volume effect correction for surface-based cortical mapping. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai.
      • Conference paper
        Topfer, R., Foias, A., Stikov, N. & Cohen-Adad, J. (2017). Real-time shimming of the humain spinal cord using a 24-channel shim array coil [Poster]. Presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai.
      • Conference paper
        De Leener, B., Granberg, T., Fink, K., Stikov, N. & Cohen-Adad, J. (2017). Repeatability and reproducibility of spinal cord atrophy measurements in a multiple sclerosis population using the spinal cord toolbox. Presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/0413.html
      • Conference paper
        Gros, C., De Leener, B., Martin, A.R., Fehlings, M.G., Callot, V., Stikov, N. & Cohen-Adad, J. (2017). Robust and automatic spinal cord detection on multiple MRI contrasts using machine learning. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/2430.html
      • Conference paper
        Duval, T., Smith, V., Mingasson, T., Klawiter, E., Stikov, N. & Cohen-Adad, J. (2017). Scan-rescan of AxCaliber, macromolecular tissue volume and g-ratio in the spinal cord. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/3472.html
      • Conference paper
        Lopez Rios, N., Foias, A., Lodygensky, G.A., Stikov, N., Dehaes, M. & Cohen-Adad, J. (2017). Size-adaptable 13-channel receive array for brain imaging in human neonates at 3T. [Poster]. Presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai.
      • Conference paper
        Lévy, S., Khatibi, A., Mangeat, G., Chen, J.-I., Martinu, K., Rainville, P., Stikov, N. & Cohen-Adad, J. (2017). Statistical combinations of T1, MTR, Mtsat and macromolecular tissue volume to improve myelin content estimation in the human spinal cord at 3T [Poster]. Presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/0916.html
      • Conference paper
        Martin, A.R., De Leener, B., Cohen-Adad, J., Cadotte, D.W., Kalsi-Ryan, S., Wilson, J.R., Tetreault, L., Nouri, A., Crawley, A., Mikulis, D.J., Ginsberg, H. & Fehlings, M.G. (2017). Toward clinical translation of quantitative spinal cord MRI : serial monitoring to identify disease progression in patients with degenerative cervical myelophaty. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai.
      • Conference paper
        Duval, T., Mingasson, T., Klawiter, E., Stikov, N. & Cohen-Adad, J. (2017). Translating AxCaliber on a clinical system : 600mT/m versus optimized 80mT/m protocol. Paper presented at the ISMRM 25th annual meeting & Exhibition, Honolulu, Hawai. Retrieved from https://cds.ismrm.org/protected/17MProceedings/PDFfiles/1760.html
    • 2016
      • Conference paper
        Martin, A.R., De Leener, B., Cohen-Adad, J., Aleksanderek, I., Cadotte, D.W. & Fehlings, M.G. (2016). A clinically feasible quantitative MRI protocol to assess tissue injury in the cervical spinal cord using DTI, MT, and T2*-weighted imaging : reliability and variations with confounding variables. Paper presented at the 31st NASS annual meeting, Boston, Massachusetts. Retrieved from https://doi.org/10.1016/j.spinee.2016.07.109
      • Conference paper
        Martin, A.R., De Leener, B., Aleksanderek, I., Cohen-Adad, J., Cadotte, D.W., Kalsi-Ryan, S., Tetreault, L., Crawley, A.P., Ginsberg, H., Mikulis, D. & Fehlings, M.G. (2016). A Prospective Longitudinal Study in Degenerative Cervical Myelopathy Using Quantitative Microstructural MRI with Tract-Specific Metrics [Poster]. Presented at the 24th Annual Meeting of ISMRM, Singapore. Retrieved from https://cds.ismrm.org/protected/16MProceedings/PDFfiles/0853.html
      • Conference paper
        Mangeat, G., Ouellette, R., Treaba, C.A., Granberg, T., Louapre, C., Stikov, N., Sloane, J.A., Klawiter, E., Mainero, C. & Cohen-Adad, J. (2016). Association between cortical demyelination and structural connectomics in early multiple sclerosis [Oral presentation]. Presented at the ISMR 24th annual Meeting and Exhibition, Singapore. Retrieved from https://cds.ismrm.org/protected/16MProceedings/PDFfiles/0237.html
      • Conference paper
        Martin, A., De Leener, B., Cohen-Adad, J., Aleksanderek, I., Cadotte, D., Crawley, A., Ginsberg, H., Mikulis, D. & Fehlings, M. (2016). Clinically Feasible Microstructural MRI to Assess Cervical Spinal Cord Tissue Injury: Methods, Normative data, and Reliability [Abstract]. Paper presented at the 34th Annual National Neurotrauma Symposium, Lexington, Kentucky. (Published in Journal of Neurotrauma, 33(13), A49-A49). Retrieved from https://doi.org/10.1089/neu.2016.29008.abstracts
      • Conference paper
        Dupont, S., De Leener, B., Taso, M., Stikov, N., Callot, V. & Cohen-Adad, J. (2016). Fully-integrated framework for registration of spinal cord white and gray matter [Poster]. Presented at the 24th Annual Meeting of ISMRM, Singapore. Retrieved from https://cds.ismrm.org/protected/16MProceedings/PDFfiles/1132.html
      • Conference paper
        De Leener, B., Taso, M., Fonov, V., Le Troter, A., Stikov, N., Collins, D., Callot, V. & Cohen-Adad, J. (2016). Fully-integrated T1, T2, T2*, white and gray matter atlases of the spinal cord [Poster]. Presented at the 24th Annual Meeting of ISMRM, Singapore. Retrieved from https://cds.ismrm.org/protected/16MProceedings/PDFfiles/1129.html
      • Conference paper
        Martin, A., De Leener, B., Cohen-Adad, J., Aleksanderek, I., Cadotte, D., Kalsi-Ryan, S., Tetreault, L., Crawley, A., Ginsberg, H., Mikulis, D. & Fehlings, M. (2016). Microstructural Cervical Spinal Cord MRI Quantifies Tract-Specific Injury and Correlates with Global and Focal Deficits [Abstract]. Paper presented at the 34th Annual National Neurotrauma Symposium, Lexington, Kentucky. (Published in Journal of Neurotrauma, 33(13), A10-A11). Retrieved from https://doi.org/10.1089/neu.2016.29008.abstracts
      • Conference paper
        Germain, G., Stockmann, J., Topfer, R., Wald, L., Stikov, N. & Cohen-Adad, J. (2016). Optimization of geometry for combined RF/shim coil arrays for the spinal cord [Poster]. Presented at the 24th Annual Meeting of ISMRM, Singapore. Retrieved from https://cds.ismrm.org/protected/16MProceedings/PDFfiles/1154.html
      • Conference paper
        Cabana, J.-F., Gu, Y., Boudreau, M., Levesque, I., Atchia, Y., Sled, J., Narayanan, S., Arnold, P., Pike, G., Cohen-Adad, J., Duval, T., Vuong, M.-T. & Stikov, N. (2016). Quantitative Magnetization Transfer Imaging Made Easy with qMTLab: Software for Data Simulation, Analysis and Visualisation. Paper presented at the 24th Annual Meeting of ISMRM, Singapore. Retrieved from https://cds.ismrm.org/protected/16MProceedings/PDFfiles/3205.html
      • Conference paper
        Martin, A.R., Aleksanderek, I., Cohen-Adad, J., Tarmohamed, Z., Tetreault, L., Smith, N., Cadotte, D.W., Crawley, A., Ginsberg, H., Milukis, D.J. & Fehlings, M.G. (2016). Translating state-of-art spinal cord MRI techniques to clinical use : a systematic review of clinical studies utilizing DTI, MT, MWF, MRS and fMRI [Oral presentation]. Presented at the ISMR 24th annual meeting and Exhibition, Singapore. Retrieved from https://cds.ismrm.org/protected/16MProceedings/PDFfiles/0846.html
      • Conference paper
        Duval, T., Perraud, B., Vuong, M.-T., Lopez Rios, N., Stikov, N. & Cohen-Adad, J. (2016). Validation of quantitative MRI metrics using full slice histology with automatic axon segmentation [Poster]. Presented at the 24th Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Singapore.
      • Conference paper
        Topfer, R., Germain, G., Stockmann, J., Metzemaekers, K., Hetherington, H., Paquin, R., Starewicz, P., Stikov, N. & Cohen-Adad, J. (2016). Very-high order shimming in the human spinal cord using a dedicated 24-channel array coil. Paper presented at the 24th Annual Meeting of ISMRM, Singapore. Retrieved from https://cds.ismrm.org/protected/16MProceedings/PDFfiles/3628.html
    • 2015
      • Conference paper
        Topfer, R., Lo, K.-M., Metzemaekers, K., Jette, D., Hetherington, H., Starewicz, P. & Cohen-Adad, J. (2015). A 24-channel shim array for real-time shimming of the human spinal cord: Characterization and proof-of-concept experiment. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/3083.pdf
      • Conference paper
        Pizzolato, M., Wassermann, D., Duval, T., Campbell, J.S.W., Boutelier, T., Cohen-Adad, J. & Deriche, R. (2015). A Temperature Phantom to Probe the Ensemble Average Propagator Asymmetry: an In-Silico Study. Paper presented at the Computational Diffusion Magnetic Resonance Imaging: MICAAI Workshop, Munich, Germany (pp. 183-194). Retrieved from https://doi.org/10.1007/978-3-319-28588-7_16
      • Conference paper
        Yiannakas, M., Mustafa, A., De Leener, B., Cohen-Adad, J., Kearney, H., Miller, D. & Wheeler-Kingshott, C.A.M.G. (2015). Fully automated segmentation of the cervical spinal cord using PropSeg: application to multiple sclerosis. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/4354.pdf
      • Conference paper
        Duval, T., Witzel, T., Keil, B., Wald, L.L., Smith, V., Klawiter, E.C. & Cohen-Adad, J. (2015). Impact of noise bias with parallel imaging for axon diameter estimation with q-space MR. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/2950.pdf
      • Conference paper
        Duval, T., Levy, S., Mezer, A., Witzel, T., Keil, B., Smith, V., Wald, L., Klawiter, E. & Cohen-Adad, J. (2015). In vivo mapping of myelin g-ratio in the human spinal cord. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/0005.pdf
      • Conference paper
        Liu, W., Bhat, H., Cohen-Adad, J., Setsompop, K., Wang, D., Beck, T., Cauley, K., Zhou, K. & Porter, D. (2015). Large-FOV Tractography of the Brain and Spinal Cord with Reduced Scan Time: A Study using Diffusion-Weighted, Readout-Segmented EPI and Simultaneous Multi-Slice Acceleration. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/4434.pdf
      • Conference paper
        Mangeat, G., Govindarajan, S., Kinkel, R., Mainero, C. & Cohen-Adad, J. (2015). Multivariate combination of magnetization transfer ratio and quantitative T2* to detect subpial demyelination in multiple sclerosis. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/0823.pdf
      • Conference paper
        Mangeat, G., Louapre, C., Herranz, E.T., Reaba, C., Ouellette, R., Sloane, J.A., Klawiter, E.C., Cohen-Adad, J. & Mainero, C. (2015). Multivariate combination of quantitative T2* and T1 at 7T MRI detects in vivo subpial demyelination in the early stages of MS. Paper presented at the 31st Congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS 2015), Barcelona, Spain.
      • Conference paper
        Martin, A.R., Aleksanderek, I., Cohen-Adad, J., Cadotte, D.W., Kalsi-Ryan, S., Nugaeva, N., De Leener, B., Mikulis, D., Crawley, A.P., Ginsberg, H. & Fehlings, M.G. (2015). Next-Generation MRI of the Human Spinal Cord: Quantitative Imaging Biomarkers for Cervical Spondylotic Myelopathy (CSM). Paper presented at the 31th Annual Meeting of The Congress of Neurological Surgeons, New Orleans, Louisiana, USA.
      • Conference paper
        Martin, A.R., Aleksanderek, I., Cohen-Adad, J., Cadotte, D.W., Kalsi-Ryan, S., Nugaeva, N., De Leener, B., Mikulis, D.J., Crawley, A.P., Ginsberg, H. & Fehlings, M.G. (2015). Next-generation MRI of the human spinal cord : quantitative imaging biomarkers for cervical spondylotic myelopathy (CSM). Paper presented at the 13th Imaging Network Ontario Symposium (IMNO 2015), London, Ontario.
      • Conference paper
        Martin, A.R., Aleksanderek, I., Cohen-Adad, J., Cadotte, D.W., Kalsi-Ryan, S., Nugaeva, N., Mikulis, D.J., Crawley, A., Ginsberg, H. & Fehlings, M.G. (2015). Next-generation MRI of the human spinal cord: Translating measures of microarchitecture and function to clinical utilization. Paper presented at the 13th Imaging Network Ontario Symposium, London, Ontario, Canada. Retrieved from http://imno.ca/sites/default/files/ImNO%202017%20Full%20Program.pdf
      • Conference paper
        De Leener, B., Roux, A., Taso, M., Callot, V. & Cohen-Adad, J. (2015). Spinal cord gray and white matter segmentation using atlas deformation. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/4424.pdf
      • Conference paper
        De Leener, B., Roux, A., Levy, S., Duval, T. & Cohen-Adad, J. (2015). Spinal Cord Toolbox: Automated Software For Processing Quantitative MRI Data Of The Spinal Cord. Paper presented at the 4th ISCoS And Asia Joint Scientific Meeting, Montréal, Québec.
      • Conference paper
        Touati, J., Taso, M., Fonov, V., Le Troter, A., De Leener, B., Collins, D., Callot, V. & Cohen-Adad, J. (2015). T1 and T2 template of the human brainstem and spinal cord. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/4435.pdf
      • Conference paper
        De Leener, B., Roux, A., Touati, J., Levy, S., Taso, M., Fonov, V., Collins, D., Callot, V. & Cohen-Adad, J. (2015). Template-based analysis of multi-parametric MRI data with the Spinal Cord Toolbox. Paper presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from https://cds.ismrm.org/protected/15MProceedings/PDFfiles/4437.pdf
      • Conference paper
        Duval, T., Gasecka, A., Pouliot, P., Côté, D., Stikov, N. & Cohen-Adad, J. (2015). Validation of MRI microstructure measurements with Coherent Anti-Stokes Raman Scattering (CARS) [Poster]. Presented at the ISMRM 23rd Annual Meeting & Exhibition, Toronto, Ontario, Canada. Retrieved from http://archive.ismrm.org/2015/0682.html
    • 2014
      • Conference paper
        Benhamou, M., Fonov, V., Taso, M., Le Troter, A., Sdika, M., Collins, D.L., Callot, V. & Cohen-Adad, J. (2014). Atlas of white-matter tracts in the human spinal cord. Paper presented at the 22nd Annual Meeting of ISMRM, Milan, Italy. Retrieved from https://cds.ismrm.org/protected/14MProceedings/PDFfiles/0013.pdf
      • Conference paper
        De Leener, B., Cohen-Adad, J. & Kadoury, S. (2014). Automatic 3D segmentation of spinal cord MRI using propagated deformable models. Paper presented at the Medical Imaging 2014: Image Processing, San Diego, California, USA (pp. 90343R-90343R-7). Retrieved from https://doi.org/10.1117/12.2043183
      • Conference paper
        Louapre, C., Govindarajan, S.T., Gianni, C., Cohen‐Adad, J., Kinkel, R.P. & Mainero, C. (2014). Exploring the link between resting-state functional connectivity in the default mode network and subpial pathology in MS using multimodal 7 Tesla MRI. Paper presented at the ACTRIMS-ECTRIMS conference (MS Boston 2014), Boston, Mass. (pp. 524). Retrieved from https://onlinelibrary.ectrims-congress.eu/ectrims/2014/ACTRIMS-ECTRIMS2014/64227/cline.louapre.exploring.the.link.between.resting-state.functional.connectivity.html
      • Conference paper
        Louapre, C., Govindarajan, S.T., Giannì, C., Cohen-Adad, J., Tobyne, S., Kinkel, R.P. & Mainero, C. (2014). Intracortical laminar pathology in the motor cortex is associated with tractographically connected white matter injury in multiple sclerosis : a multimodal 7T and 3T MRI study. Paper presented at the 66th Annual Meeting of American Academy of Neurology, Philadelphia, USA.
      • Conference paper
        Duval, T., McNab, J.A., Setsompop, K., Witzel, T., Schneider, T., Huang, S.Y., Keil, B., Klawiter, E.C., Wald, L.L. & Cohen-Adad, J. (2014). In vivo estimation of axon diameter in the human spinal cord using 300 mT/m gradients. Paper presented at the 22nd Annual Meeting of ISMRM, Milan, Italy. Retrieved from https://cds.ismrm.org/protected/14MProceedings/PDFfiles/0099.pdf
      • Conference paper
        Fonov, V., Le Troter, A., Taso, M., Leveque, G., Benhamou, M., Sdika, M., Collins, D.L., Callot, V. & Cohen-Adad, J. (2014). MNI-Poly-AMU average anatomical template for automatic spinal cord measurements. Paper presented at the 22nd Annual Meeting of ISMRM, Milan, Italy. Retrieved from https://cds.ismrm.org/protected/14MProceedings/PDFfiles/1713.pdf
      • Conference paper
        Cohen-Adad, J., Samson, R.S., Schneider, T., Smith, A.K., Benhamou, M., Leveque, G., Smith, S.A. & Wheeler-Kingshott, C.A.M.G. (2014). Multisite DTI of the spinal cord with integrated template and white matter atlas processing pipeline. Paper presented at the 22nd Annual Meeting of ISMRM, Milan, Italy. Retrieved from https://cds.ismrm.org/protected/14MProceedings/PDFfiles/1727.pdf
      • Conference paper
        De Leener, B., Ullmann, E., Kadoury, S. & Cohen‐Adad, J. (2014). PropSeg : automatic spinal cord segmentation method for MR images using propagated deformation models. Paper presented at the 20th Annual Meeting of OHBM, Hamburg, Germany.
      • Conference paper
        Cadotte, D.W., Cadotte, A., Cohen-Adad, J., Fleet, D., Livne, M., Mikulis, D. & Fehlings, M.G. (2014). Resolving the anatomic variability of the human cervical spinal cord : a solution to facilitate advanced neural imaging. Paper presented at the 22nd Annual Meeting of ISMRM, Milan, Italy. Retrieved from https://cds.ismrm.org/protected/14MProceedings/PDFfiles/1719.pdf
      • Conference paper
        Cohen-Adad, J., De Leener, B., Benhamou, M., Cadotte, D., Fleet, D., Cadotte, A., Fehlings, M.G., Pelletier Paquette, J.P., Thong, W., Taso, M., Collins, D.L., Callot, V. & Fonov, V. (2014). Spinal cord toolbox : an open-source framework for processing spinal cord MRI data. Paper presented at the 20th Annual Meeting of OHBM, Hamburg, Germany. Retrieved from https://www.humanbrainmapping.org/files/2014MeetingFiles/2014Posters.pdf
      • Conference paper
        Huang, S.Y., Nummenmaa, A., Witzel, T., Duval, T., Cohen-Adad, J., Wald, L.L. & McNab, J.A. (2014). The impact of gradient strength on in vivo diffusion of MRI estimates of axon diameter. Paper presented at the 22nd Annual Meeting of ISMRM, Milan, Italy. Retrieved from https://cds.ismrm.org/protected/14MProceedings/PDFfiles/0791.pdf
      • Conference paper
        Taso, M., Le Troter, A., Sdika, M., Fonov, V., Cohen-Adad, J., Guye, M., Ranjeva, J.P. & Callot, V. (2014). Validation of a 2D spinal cord probabilistic atlas : Application to FA measurement and VBM study of the GM atrophy occurring with age. Paper presented at the 22nd Annual Meeting of ISMRM, Milan, Italy. Retrieved from https://cds.ismrm.org/protected/14MProceedings/PDFfiles/1710.pdf
      • Conference paper
        Samson, R.S., Cohen-Adad, J., Schneider, T., Smith, A.K., Smith, S.A. & Wheeler-Kingshott, C.A.M.G. (2014). ZOOM and non-ZOOM spinal cord diffusion tensor imaging protocols for multi-centre studies. Paper presented at the 22nd Annual Meeting of ISMRM, Milan, Italy. Retrieved from https://cds.ismrm.org/protected/14MProceedings/PDFfiles/1723.pdf
    • 2013
      • Conference paper
        Mainero, C., Govindarajan, S.T., Kinkel, R., Nielsen, A.S. & Cohen-Adad, J. (2013). A gradient in cortical T2*relaxation decay changes at 7 Telsa MRI in patients with multiple sclerosis. Paper presented at the ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. Retrieved from https://cds.ismrm.org/protected/13MProceedings/PDFfiles/3608.PDF
      • Conference paper
        Wedeen, V., Wang, R., Reese, T., Witzel, T., Cohen-Adad, J., Rosen, B.R. & Wald, L.L. (2013). Imaging the Grid Structure of the Brain with DSI and QBI with the 3T connectom instrument : conditional validation of in vivo MRI tractography in humans. Paper presented at the ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. Retrieved from https://cds.ismrm.org/protected/13MProceedings/PDFfiles/2125.PDF
      • Conference paper
        Louapre, C., Govindarajan, S., Gianni, C., Cohen-Adad, J., Tobyne, S., Kinkel, R. & Mainero, C. (2013). Intracortical laminar pathology in the motor cortex is associated with proximal underlying white matter injury in multiple sclerosis: a multimodal 7 T and 3T MRI study. Paper presented at the 29th Congress of the european Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS 2013), Copenhagen, Denmark.
      • Conference paper
        Govindarajan, S.T., Cohen-Adad, J., Fan, A., Sormani, M.P. & Mainero, C. (2013). Laminar-specific variations of T2* relaxation devay in the cortex at 7 Tesla MRI. Paper presented at the ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. Retrieved from https://cds.ismrm.org/protected/13MProceedings/PDFfiles/1086.PDF
      • Conference paper
        Cauley, F., Abuhashem, O., Bilgic, B., Chatnuntawech, I., Cohen-Adad, J., Setsompop, K., Adalsteinsson, E. & Wald, L.L. (2013). Low-rank basis smoothing for the denoising of diffusion weighted Images. Paper presented at the ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. Retrieved from https://cds.ismrm.org/protected/13MProceedings/PDFfiles/2077.PDF
      • Conference paper
        Keil, B., Cohen-Adad, J., Porter, D.A., Biber, S., Heberlein, K., Triantafyllou, C. & Wald, L.L. (2013). Simultaneous diffusion-weighted MRI of brain and cervical spinal cord using a 64-channel head-neck array coil at 3T. Paper presented at the ISMRM 21th Annual Meeting & Exhibition, Salt Lake City, Utah, USA. Retrieved from https://cds.ismrm.org/protected/13MProceedings/PDFfiles/1210.PDF
      • Conference paper
        El Mendili, M.M., Chen, R., Pélégrini-Issac, M., Cohen-Adad, J., Lehéricy, S., Benali, H. & Pradat, P.F. (2013). Validation of a cord atrophy measurements method in motor neuron diseases. Paper presented at the 11th Annual meeting of the European Network for the cure of ALS (ENCALS), Sheffield, United Kingdom.
    • 2012
      • Conference paper
        Bilgic, B., Setsompop, K., Cohen-Adad, J., Yendiki, A., Wald, L.L. & Adalsteinsson, E. (2012). Accelerated diffusion spectrum imaging with compressed sensing using adaptive dictionaries. Paper presented at the 15th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2012), Nice, France. (Published in Magnetic Resonance in Medicine, 68(6), 1747-1754). Retrieved from https://doi.org/10.1002/mrm.24505
      • Conference paper
        Cohen-Adad, J., Polimeni, J.R., Rosen, B.R., Mainero, C. & Wald, L.L. (2012). BO-orientation dependence can characterize cortical and sub-cortical fibers in vivo at 7T. Paper presented at the 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. Retrieved from https://cds.ismrm.org/protected/12MProceedings/PDFfiles/0422.pdf
      • Conference paper
        Zhao, W., Cohen-Adad, J., Polimeni, J.R., Guerin, B., Keil, B., Serano, P., Mareyam, A., Hoecht, P. & Wald, L.L. (2012). 19-channel Rx array coil and 4-channel Tx loop array for cervical spinal cord imaging at 7T MRI. Paper presented at the 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. Retrieved from https://cds.ismrm.org/protected/12MProceedings/PDFfiles/0431.pdf
      • Conference paper
        Bhat, H., Cohen-Adad, J., Tisdall, M.D., Van der Kouwe, A. & Heberlein, K. (2012). Demonstration of a novel prospective motion correction technique for diffusion neuroimaging. Paper presented at the 18th Annual Meeting of the Organization for Human Brain Mapping (OHBM), Beijing, Chine.
      • Conference paper
        Cohen-Adad, J., Tisdall, M.D., Kimmlingen, R., Eberlein, E., Witzel, T., Hoecht, P., Keil, B., Nistler, J., Lehne, D., Heberlein, K., McNab, J.A., Thein, H., Schmitt, F., Rosen, B.R., Wedeen, V.J. & Wald, L.L. (2012). Improved Q-Ball imaging using a 300 mT/m human gradient. Paper presented at the 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. Retrieved from https://cds.ismrm.org/protected/12MProceedings/PDFfiles/0694.pdf
      • Conference paper
        Tisdall, M.D., Witzel, T., Tountcheva, V., McNab, J.A., Cohen-Adad, J., Kimmlingen, R., Hoecht, P., Eberlein, E., Heberlein, K., Schmitt, F., Thein, H., Wedeen, V.J., Rosen, B.R. & Wald, L.L. (2012). Improving SNR in high b-value diffusion imaging using Gmax=300 mT/m human gradients. Paper presented at the 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. Retrieved from https://cds.ismrm.org/protected/12MProceedings/PDFfiles/2738.pdf
      • Conference paper
        McNab, J.A., Witzel, T., Bhat, H., Heberlein, K., Keil, B., Cohen-Adad, J., Tisdall, M.D. & Wald, L.L. (2012). In vivo human brain measurements of axon diameter distributions in the corpus callosum using 300 mT/m maximum gradient strengths. Paper presented at the 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. Retrieved from https://cds.ismrm.org/protected/12MProceedings/PDFfiles/3563.pdf
      • Conference paper
        Wedeen, V.J., Wald, L.L., Cohen-Adad, J., Tisdall, M.D., McNab, J.A., Wang, R., Witzel, T., Kimmlingen, R., Eberlein, E., Hoecht, P., Keil, B., Nistler, J., Lehne, D., Heberlein, K., Thein, H., Schmitt, F., Van Horn, J., Toga, A.W. & Rosen, B.R. (2012). In vivo imaging of fiber pathways of the human brain with ultra-high gradients. Paper presented at the 20th Annual Meeting of the International Society of Magnetic Resonance in Medicine (ISMRM), Melbourne, Australie. Retrieved from https://cds.ismrm.org/protected/12MProceedings/PDFfiles/1876.pdf
      • Conference paper
        Atassi, N., Ratai, E.-M., Cohen-Adad, J., Lawson, R., Dheel, C., Keil, B., Triantafyllou, C. & Cudkowicz, M. (2012). Mechanism-based neuroimaging using 7-T MRI in amyotrophic lateral sclerosis (ALS). Paper presented at the 25th Annual Massachusetts ADRC, Boston, MA.
      • Conference paper
        Cohen-Adad, J., Zhao, W., Wald, L.L., Buchbinder, B. & Oaklander, A.L. (2012). Preliminary clinical utility of advanced spinal-cord MRI. Paper presented at the 2012 Annual Meeting of the American Neurological Association, Boston, MA (pp. 68).
      • Conference paper
        Govindarajan, S., Sormani, M., Cohen-Adadm, J. & Mainero, C. (2012). Reproducibility of surface-based laminar measures of T2* relaxation decay in the cortex at 7 Tesla MRI. Paper presented at the 28th congress of the European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS 2012), Lyon, France.
      • Conference paper
        Govindarajan, S.T., Sormani, M.P., Cohen-Adad, J. & Mainero, C. (2012). Reproductibility of surface-based laminar measures of T2* relaxation decay in the cortex at 7 Tesla MRI. Paper presented at the 6th congress of ECTRIMS, Lyon, France. Retrieved from https://doi.org/10.1177/1352458512459021
    • 2011
      • Conference paper
        Cohen-Adad, J., Helmer, K.G., Belnner, T., Kinkel, R.P., Rosen, B.R. & Mainero, C. (2011). Characterization of cortical pathology using T2* mapping at 7T. Paper presented at the Joint Triennial Congress of the European and Americas Committees on Treatment and Research in Multiple Sclerosis, Amsterdam, The Netherlands. Retrieved from https://doi.org/10.1177/1352458511422292
      • Conference paper
        Cohen-Adad, J., Helmer, K.G., Belnner, T., Wald, L.L., Nielsen, A.S., Kinkel, R.P., Rosen, B.R. & Mainero, C. (2011). Characterization of cortical pathology using T2* mapping at 7T. Paper presented at the Tykeson Fellows Conference, Dallas, Texas.
      • Conference paper
        Cohen-Adad, J., Helmer, K.G., Benner, T., Polimeni, J.R., McNab, J.A., Wald, L.L., Rosen, B.R. & Mainero, C. (2011). Cortical surface and depth analysis of T2* in the human brain. Paper presented at the 17th OHBM annual meeting, Québec, Canada.
      • Conference paper
        Cohen-Adad, J., El Mendili, M.M., Lehéricy, S., Pradat, P.F., Blancho, S., Rossignol, S. & Benali, H. (2011). Demyelination in the injured human spinal cord detected with diffusion and magnetization transfer imaging. Paper presented at the 19th ISMRM annual meeting and exhibition, Montréal, Québec. Retrieved from https://cds.ismrm.org/protected/11MProceedings/PDFfiles/398.pdf
      • Conference paper
        Pradat, P.F., Cohen-Adad, J., El Mendili, M.M., Lehéricy, S., Blancho, S., Meininger, V., Rossignol, S. & Benali, H. (2011). Diffusion and magnetization transfer imaging detects spinal cord lesions in amyotrophic lateral scerosis. Paper presented at the 19th ISMRM annual meeting and exhibition, Montréal, Québec. Retrieved from https://cds.ismrm.org/protected/11MProceedings/PDFfiles/2465.pdf
      • Conference paper
        Cohen-Adad, J., Buchbinder, B., Wald, L.L. & Oaklander, A.L. (2011). Evidence of Wallerian degeneration in the human spinal cord using in vivo high-resolution DTI and magnetization transfer. Paper presented at the 19th ISMRM annual meeting and exhibition, Montréal, Québec. Retrieved from https://cds.ismrm.org/protected/11MProceedings/PDFfiles/4299.pdf
      • Conference paper
        Cohen-Adad, J., El Mendili, M.M., Blancho, S., Morizot-Koutlidis, R., Lehéricy, S., Rossignol, S., Benali, H. & Pradat, P.F. (2011). Involvement of spinal sensory pathway inamyotrophic lateral sclerosis detected with DTI and magnetization transfer. Paper presented at the 17th OHBM annual meeting, Québec, Canada. Retrieved from https://www.humanbrainmapping.org/files/2011MeetingFiles/HBM2011ProgramBook.pdf
      • Conference paper
        Cohen-Adad, J., Helmer, K.G., Nielsen, A.S., Greve, D.N., Benner, T., Kinkel, R.P., Rosen, B.R. & Mainero, C. (2011). Quantitative characterization of cortical pathology in multiple sclerosis using surface-based analysis of T2* relaxation at 7T. Paper presented at the 19th ISMRM annual meeting and exhibition, Montréal, Québec. Retrieved from https://cds.ismrm.org/protected/11MProceedings/PDFfiles/603.pdf
    • 2010
      • Conference paper
        Mareyam, A., Cohen-Adad, J., Blau, J.N., Polimeni, J.R., Keil, B. & Wald, L.L. (2010). A 32 cannel receive-only 3T array optimized for brain and cervical spine imaging. Paper presented at the 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. Retrieved from https://cds.ismrm.org/protected/10MProceedings/PDFfiles/1491_7168.PDF
      • Conference paper
        Cohen-Adad, J., Descoteaux, M. & Wald, L.L. (2010). Assessing the quality of HARDI data using bootstrap on Qu-Ball reconstruction. Paper presented at the 16th OHBM annual meeting, Barcelona, Spain.
      • Conference paper
        Mainero, C., Lima, C.S., Cohen-Adad, J., Greve, D.N., Benner, T., Radding, A., Kinkel, R., Fischl, B. & Rosen, B. (2010). Evidence of distributed subpial T2* signal changes at 7T in multiple sclerosis : an histogram based approach. Paper presented at the 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. Retrieved from https://cds.ismrm.org/protected/10MProceedings/PDFfiles/4321_6760.PDF
      • Conference paper
        Sharman, M., Cohen-Adad, J., Descoteaux, M., Messé, A., Benali, H. & Lehéricy, S. (2010). Impact of outliers in DTI and Q-Ball imaging : clinical implications and correction strategies. Paper presented at the 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. Retrieved from https://cds.ismrm.org/protected/10MProceedings/PDFfiles/1695_2702.PDF
      • Conference paper
        Cohen-Adad, J., Mareyam, A., Polimeni, J.R. & Wald, L.L. (2010). Improving diffusion and functional MRI of the brain and spinal cord using a new 32ch coil. Paper presented at the 16th OHBM annual meeting, Barcelona, Spain.
      • Conference paper
        Cohen-Adad, J., McNab, J.A., Benner, T., Descoteaux, M., Mareyam, A., Wedeen, V.J. & Wald, L.L. (2010). Improving high-resolution Q-Ball imaging with a head insert gradient : bootstrap and SNR analysis. Paper presented at the 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. Retrieved from https://cds.ismrm.org/protected/10MProceedings/PDFfiles/1606_6737.PDF
      • Conference paper
        Setsompop, K., Cohen-Adad, J., McNab, J.A., Gagoski, B.A., Wedeen, V.J. & Wald, L.L. (2010). Improving SNR per unit time in diffusion imaging using a blipped-CAIPIRINHA simultaneous multi-slice EPI acquisition. Paper presented at the 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. Retrieved from https://cds.ismrm.org/protected/10MProceedings/PDFfiles/187_5982.PDF
      • Conference paper
        Wassermann, D., Cohen-Adad, J., Lehericy, S., Benali, H., Rossignol, S. & Deriche, R. (2010). Straightening the spinal Cord using fibre tractography. Paper presented at the IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, Netherlands (pp. 1377-1380). Retrieved from https://doi.org/10.1109/ISBI.2010.5490254
      • Conference paper
        Mainero, C., Cohen-Adad, J., Greve, D.N., Benner, T., Radding, A., Fischl, B., Kinkel, R.P. & Rosen, B.R. (2010). Subpial pathology as a substrate for cortical thinning in multiple sclerosis : a 7T MRI study. Paper presented at the 16th OHBM annual meeting, Barcelona, Spain.
      • Conference paper
        Cohen-Adad, J., Greve, D.N., Benner, T., Radding, A., Kinkel, R., Rosen, B., Fischl, B. & Mainero, C. (2010). Surface-based analysis of subpial T2* signal changes at 7T in multiple sclerosis. Paper presented at the 18th ISMRM annual meeting and exhibition, Stockholm, Sweden. Retrieved from https://cds.ismrm.org/protected/10MProceedings/PDFfiles/2071_6852.PDF
    • 2009
      • Conference paper
        Cohen-Adad, J., Ghosh, A., Leblond, H., Descoteaux, M., Deriche, R., Benali, H. & Rossignol, S. (2009). Comparison of DTI and Q-Ball imaging metrics in a cat model of spinal cord injury. Paper presented at the 15th OHBM annual meeting, San Francisco, California.
      • Conference paper
        Gauthier, C., Cohen-Adad, J., Brooks, J.C.W., Fisher, J.A., Rossignol, S. & Hoge, R.D. (2009). Comparison of hypercapnia-induced BOLD changes in the brain and spinal cord. Paper presented at the 15th OHBM annual meeting, San Francisco, California.
      • Conference paper
        Cohen-Adad, J., Leblond, H., Ghosh, A., Descoteaux, M., Deriche, R., Benali, H. & Rossignol, S. (2009). Evolution of Q-Ball metrics for assessing the integrity of the injured spinal cord. Paper presented at the 17th ISMRM annual meeting and exhibition, Honolulu, Hawaii. Retrieved from https://cds.ismrm.org/protected/09MProceedings/PDFfiles/00638.pdf
      • Conference paper
        Cohen-Adad, J., Leblond, H., Delivet-Mongrain, H., Ghosh, A., Descoteaux, M., Deriche, R., Benali, H. & Rossignol, S. (2009). High angular resolution diffusion MRI of spinal cord injured cats. Paper presented at the 39th annual meeting of the Society for Neuroscience, Chicago, Illinois.
      • Conference paper
        Gauthier, C., Cohen-Adad, J., Brooks, J., Rossignol, S. & Hoge, R.D. (2009). Investigation of venous effects in spinal cord fMRI using hypercapnia. Paper presented at the 17th ISMRM annual meeting and exhibition, Honolulu, Hawaii. Retrieved from https://cds.ismrm.org/protected/09MProceedings/PDFfiles/03185.pdf
      • Conference paper
        Rossignol, S., Barrière, G., Frigon, A., Cohen-Adad, J. & Benali, H. (2009). Optimizing locomotion after spinal lesions [Abstract]. Presented at the 2009 Cellular and Network Functions in the Spinal Cord, Wisconsin-Madison.
      • Conference paper
        Macini-Marie, A., Cohen-Adad, J., Jimenez, J., Corcoran, C., Rainville, P., Stip, E., Potvin, S. & Mendrek, A. (2009). Sex differences in corpus callosum frantional anisotropy in schizophrenia patients : a pilot tractography study using diffusion tensor imaging. Paper presented at the 12th International Congress on Schizophrenia Research (ICOSR 2009), San Diego, California (pp. 210-211).
      • Conference paper
        Brooks, J.C.W., Cohen-Adad, J., Gauthier, C., Hoge, R.D. & Rossignol, S. (2009). Studying the sensorimotor pathways : brain, brainstem, spinal cord imaging. Paper presented at the 15th OHBM annual meeting, San Francisco, California.
      • Conference paper
        Rossignol, S., Barrière, G., Frigon, A., Cohen-Adad, J. & Benali, H. (2009). The importance of the spinal CPG in the recovery of locomotion after partial spinal cord lesions. Paper presented at the 2nd International Association of Neurorestoratology annual Conference (INAR 2009), Beijing, China.
      • Conference paper
        Cohen-Adad, J., Gauthier, C., Brooks, J.C.W., Leblond, H., Hoge, R.D., Fisher, J.A., Beaumont, E., Dubeau, S., Lesage, F., Doyon, J., Benali, H. & Rossignol, S. (2009). Venous effect in spinal cord fMRI : insights from intrinsic optical imaging and laser speckle. Paper presented at the 15th OHBM annual meeting, San Francisco, California.
    • 2008
      • Conference paper
        Cohen-Adad, J., Gauthier, C., Rossignol, S., Benali, H. & Hoge, R.D. (2008). BOLD signal responses to controlled hypercapnia in human spinal cord. Paper presented at the ISMRM 16th Scientific Meeting & Exhibition, Toronton, On. Retrieved from https://cds.ismrm.org/protected/08MProceedings/PDFfiles/03403.pdf
      • Conference paper
        Xie, G., Piché, M., Cohen-Adad, J., Kosh Nejad, M., Perlbarg, V., Hoge, R., Benali, H., Rossignol, S. & Rainville, P. (2008). Characterizing and controlling for physiological noise in human cervical spinal fMRI in response to noxious stimuli. Paper presented at the 38th Annual meeting of the Society for Neuroscience, Washington, D.C.
      • Conference paper
        Cohen-Adad, J., Descoteaux, M., Rossignol, S., Hoge, R.D., Deriche, R. & Benali, H. (2008). Detection of multiple pathways in the spinal cord white matter using q-ball imaging. Paper presented at the 5th IEEE International Symposium on Biomedical Imaging : From Nano to Macro, Paris, France (pp. 696-699). Retrieved from https://doi.org/10.1109/ISBI.2008.4541091
    • 2007
      • Conference paper
        Cohen-Adad, J., Piche, M., Rainville, P., Benali, H. & Rossignol, S. (2007). Impact of realignment on spinal functional MRI time series. Paper presented at the 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Lyon, France (pp. 2126-2129). Retrieved from https://doi.org/10.1109/IEMBS.2007.4352742
      • Conference paper
        Cohen-Adad, J., Benali, H., Hoge, R.D. & Rossignol, S. (2007). In vivo assessment of spinal cord integrity by diffusion tensor imaging. Paper presented at the 37th annual meeting of the Society for Neuroscience, San Diego, California.
      • Conference paper
        Cohen-Adad, J., Benali, H. & Rossignol, S. (2007). Methodology for MR diffusion tensor imaging of the cat spinal cord. Paper presented at the 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Lyon, France (pp. 323-326). Retrieved from https://doi.org/10.1109/IEMBS.2007.4352289
      • Conference paper
        Cohen-Adad, J., Benali, H., Hoge, R.D., Barrière, G., Doyon, J. & Rossignol, S. (2007). Spinal cord in vivo diffusion tensor imaging of healthy human and spinalized cats. Paper presented at the 13th OHBM annual meeting, San Francisco, California.
    • 2006
      • Conference paper
        Cohen-Adad, J., Paul, P., Morandi, X. & Jannin, P. (2006). Knowledge modeling in image-guided neurosurgery : application in understanding intra-operative brain shift. Paper presented at the SPIE Medical Imaging, San Diego, California (8 pages). Retrieved from https://doi.org/10.1117/12.655752
      • Conference paper
        Cohen-Adad, J., Perlbarg, V., Doyon, J., Hoge, R.D., Beaudoin, G., Song, A., Leblond, H., Provencher, J., Rossignol, S. & Benali, H. (2006). Methodology to study functional MRI of the cat lumbar spinal cord. Paper presented at the 12th OHBM annual meeting, Florence, Italy.
  • Books (1)
  • Book chapters (6)
    • 2019
    • 2015
      • Book chapter
        Farooq, H., Genis, H., Alarcon, J., Vuong, B., Jivraj, J., Yang, V.X.D., Cohen-Adad, J., Fehlings, M.G. & Cadotte, D.W. (2015). High-resolution imaging of the central nervous system: how novel imaging methods combined with navigation strategies will advance patient care. In N. Dancause, S. Nadeau & S. Rossignol (Eds.), Sensorimotor rehabilitation at the crossroads of basic and clinical sciences (Vol. 218, pp. 55-78). Amsterdam: Elsevier. Retrieved from https://doi.org/10.1016/bs.pbr.2014.12.011
      • Book chapter
        Cohen-Adad, J., Martin, A. & Fehlings, M. (2015). Magnetic resonance imaging of the injured spinal cord: the present and the future. In L. Vialle, K. Riew & M. Ito (Eds.), AOSpine Masters Series (Vol. 7). Thieme. Retrieved from https://doi.org/10.1055/b-0036-137993
    • 2014
      • Book chapter
        Summers, P., Brooks, J.C.W. & Cohen-Adad, J. (2014). Spinal cord fMRI. In J. Cohen-Adad & C.A.M.G. Wheeler-Kingshott (Eds.), Quantitative MRI of the spinal cord. San Diego, Calif.: Academic Press. Retrieved from https://doi.org/10.1016/b978-0-12-396973-6.00015-0
  • Patents (1)