Computing Tools for Research : Différence entre versions
De Transport
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* Bibliographical database: [http://jabref.sourceforge.net/ JabRef] (the format is Bibtex, for Latex, and can be exported to Word and html among others) | * Bibliographical database: [http://jabref.sourceforge.net/ JabRef] (the format is Bibtex, for Latex, and can be exported to Word and html among others) | ||
** The file extension is .bib. Each entry needs a unique key for which I usually use <first author last name><publication year last 2 digits><first word of title>, eg saunier11investigating (see my [http://dl.dropbox.com/u/179169/saunier.bib personal publication bibliography]). Another common pitfall deals with author names: they should be <first name1> <last name1> and <first name2> <last name2> and ... | ** The file extension is .bib. Each entry needs a unique key for which I usually use <first author last name><publication year last 2 digits><first word of title>, eg saunier11investigating (see my [http://dl.dropbox.com/u/179169/saunier.bib personal publication bibliography]). Another common pitfall deals with author names: they should be <first name1> <last name1> and <first name2> <last name2> and ... | ||
| − | * File synchronization: [http://www.dropbox.com Dropbox] (proprietary), rsync with ssh | + | * File synchronization: [http://syncthing.net/ syncthing], [http://www.dropbox.com Dropbox] (proprietary), rsync with ssh |
| − | * Remote desktop: clients and servers for the VNC protocole (multi-plateform) | + | * Remote desktop: clients and servers for the VNC protocole (multi-plateform), TeamViewer (proprietary) |
* Virtualisation de systèmes d'exploitation: VirtualBox | * Virtualisation de systèmes d'exploitation: VirtualBox | ||
* Editeurs de texte: emacs (multi-plateforme), jEdit (multi-plateforme), notepad++ (Windows), gedit (Linux) | * Editeurs de texte: emacs (multi-plateforme), jEdit (multi-plateforme), notepad++ (Windows), gedit (Linux) | ||
| + | * Version Control: Mercurial, Git, Subversion | ||
* Programmation: | * Programmation: | ||
** [http://www.python.org Python]: bibliothèque scientifique [http://www.scipy.org scipy], visualisation avec matplotlib, shell interactif ipython, package scientifique [http://www.sagemath.org/ Sage], [http://www.enthought.com/products/epd.php package scientifique complet de la société Enthought] (Windows) | ** [http://www.python.org Python]: bibliothèque scientifique [http://www.scipy.org scipy], visualisation avec matplotlib, shell interactif ipython, package scientifique [http://www.sagemath.org/ Sage], [http://www.enthought.com/products/epd.php package scientifique complet de la société Enthought] (Windows) | ||
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** [http://www.cs.waikato.ac.nz/ml/weka/ Weka] | ** [http://www.cs.waikato.ac.nz/ml/weka/ Weka] | ||
** [http://gretl.sourceforge.net/ Gretl] | ** [http://gretl.sourceforge.net/ Gretl] | ||
| − | |||
* Systèmes de gestion de bases de données: | * Systèmes de gestion de bases de données: | ||
| − | ** | + | ** SQLite |
| − | ** | + | ** PostgreSQL |
| − | ** | + | ** MySQL |
* Systèmes d'information géographique (SIG): [http://www.qgis.org Quantum GIS], [http://grass.itc.it GRASS], Spatialite | * Systèmes d'information géographique (SIG): [http://www.qgis.org Quantum GIS], [http://grass.itc.it GRASS], Spatialite | ||
* Visualisation de données, création de graphiques: [http://www.gnuplot.info gnuplot] | * Visualisation de données, création de graphiques: [http://www.gnuplot.info gnuplot] | ||
Version du 11 octobre 2016 à 16:40
This page lists software tools that are useful for research. For obvious reasons, open source tools, relying on open standards, are emphasized:
- Document typesetting: Latex (first class typesetting and math/equation rendering, wikibook, The Not So Short Introduction to LATEX), WYSIWYG editor Kile and Lyx
- Bibliographical database: JabRef (the format is Bibtex, for Latex, and can be exported to Word and html among others)
- The file extension is .bib. Each entry needs a unique key for which I usually use <first author last name><publication year last 2 digits><first word of title>, eg saunier11investigating (see my personal publication bibliography). Another common pitfall deals with author names: they should be <first name1> <last name1> and <first name2> <last name2> and ...
- File synchronization: syncthing, Dropbox (proprietary), rsync with ssh
- Remote desktop: clients and servers for the VNC protocole (multi-plateform), TeamViewer (proprietary)
- Virtualisation de systèmes d'exploitation: VirtualBox
- Editeurs de texte: emacs (multi-plateforme), jEdit (multi-plateforme), notepad++ (Windows), gedit (Linux)
- Version Control: Mercurial, Git, Subversion
- Programmation:
- Python: bibliothèque scientifique scipy, visualisation avec matplotlib, shell interactif ipython, package scientifique Sage, package scientifique complet de la société Enthought (Windows)
- R: outil standard de la communauté en statistiques, très complet (clone du langage S)
- Octave: clone de Matlab
- C/C++: compilateur GCC, environnements cygwin ou MinGW (Windows)
- Libraries and tools for machine learning, data mining and statistical analysis:
- Systèmes de gestion de bases de données:
- SQLite
- PostgreSQL
- MySQL
- Systèmes d'information géographique (SIG): Quantum GIS, GRASS, Spatialite
- Visualisation de données, création de graphiques: gnuplot
