Computing Tools for Research : Différence entre versions

De Transport
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* Bibliographical database: [http://jabref.sourceforge.net/ JabRef] (the format is Bibtex, for Latex, and can be exported to Word and html among others)
 
* Bibliographical database: [http://jabref.sourceforge.net/ JabRef] (the format is Bibtex, for Latex, and can be exported to Word and html among others)
 
** The file extension is .bib. Each entry needs a unique key for which I usually use <first author last name><publication year last 2 digits><first word of title>, eg saunier11investigating (see my [http://dl.dropbox.com/u/179169/saunier.bib personal publication bibliography]). Another common pitfall deals with author names: they should be <first name1> <last name1> and <first name2> <last name2> and ...
 
** The file extension is .bib. Each entry needs a unique key for which I usually use <first author last name><publication year last 2 digits><first word of title>, eg saunier11investigating (see my [http://dl.dropbox.com/u/179169/saunier.bib personal publication bibliography]). Another common pitfall deals with author names: they should be <first name1> <last name1> and <first name2> <last name2> and ...
* File synchronization: [http://www.dropbox.com Dropbox] (proprietary), rsync with ssh
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* File synchronization: [http://syncthing.net/ syncthing], [http://www.dropbox.com Dropbox] (proprietary), rsync with ssh
* Remote desktop: clients and servers for the VNC protocole (multi-plateform)
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* Remote desktop: clients and servers for the VNC protocole (multi-plateform), TeamViewer (proprietary)
 
* Virtualisation de systèmes d'exploitation: VirtualBox
 
* Virtualisation de systèmes d'exploitation: VirtualBox
 
* Editeurs de texte: emacs (multi-plateforme), jEdit (multi-plateforme), notepad++ (Windows), gedit (Linux)
 
* Editeurs de texte: emacs (multi-plateforme), jEdit (multi-plateforme), notepad++ (Windows), gedit (Linux)
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* Version Control: Mercurial, Git, Subversion
 
* Programmation:
 
* Programmation:
 
** [http://www.python.org Python]: bibliothèque scientifique [http://www.scipy.org scipy], visualisation avec matplotlib, shell interactif ipython, package scientifique [http://www.sagemath.org/ Sage], [http://www.enthought.com/products/epd.php package scientifique complet de la société Enthought] (Windows)
 
** [http://www.python.org Python]: bibliothèque scientifique [http://www.scipy.org scipy], visualisation avec matplotlib, shell interactif ipython, package scientifique [http://www.sagemath.org/ Sage], [http://www.enthought.com/products/epd.php package scientifique complet de la société Enthought] (Windows)
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** [http://www.cs.waikato.ac.nz/ml/weka/ Weka]
 
** [http://www.cs.waikato.ac.nz/ml/weka/ Weka]
 
** [http://gretl.sourceforge.net/ Gretl]
 
** [http://gretl.sourceforge.net/ Gretl]
** Orange
 
 
* Systèmes de gestion de bases de données:
 
* Systèmes de gestion de bases de données:
** Sqlite
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** SQLite
** Postgresql
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** PostgreSQL
** Mysql
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** MySQL
 
* Systèmes d'information géographique (SIG): [http://www.qgis.org Quantum GIS], [http://grass.itc.it GRASS], Spatialite
 
* Systèmes d'information géographique (SIG): [http://www.qgis.org Quantum GIS], [http://grass.itc.it GRASS], Spatialite
 
* Visualisation de données, création de graphiques: [http://www.gnuplot.info gnuplot]
 
* Visualisation de données, création de graphiques: [http://www.gnuplot.info gnuplot]

Version du 11 octobre 2016 à 16:40

This page lists software tools that are useful for research. For obvious reasons, open source tools, relying on open standards, are emphasized:

  • Document typesetting: Latex (first class typesetting and math/equation rendering, wikibook, The Not So Short Introduction to LATEX), WYSIWYG editor Kile and Lyx
  • Bibliographical database: JabRef (the format is Bibtex, for Latex, and can be exported to Word and html among others)
    • The file extension is .bib. Each entry needs a unique key for which I usually use <first author last name><publication year last 2 digits><first word of title>, eg saunier11investigating (see my personal publication bibliography). Another common pitfall deals with author names: they should be <first name1> <last name1> and <first name2> <last name2> and ...
  • File synchronization: syncthing, Dropbox (proprietary), rsync with ssh
  • Remote desktop: clients and servers for the VNC protocole (multi-plateform), TeamViewer (proprietary)
  • Virtualisation de systèmes d'exploitation: VirtualBox
  • Editeurs de texte: emacs (multi-plateforme), jEdit (multi-plateforme), notepad++ (Windows), gedit (Linux)
  • Version Control: Mercurial, Git, Subversion
  • Programmation:
  • Libraries and tools for machine learning, data mining and statistical analysis:
  • Systèmes de gestion de bases de données:
    • SQLite
    • PostgreSQL
    • MySQL
  • Systèmes d'information géographique (SIG): Quantum GIS, GRASS, Spatialite
  • Visualisation de données, création de graphiques: gnuplot