Computing Tools for Research : Différence entre versions
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| − | + | This page lists software tools that are useful for research. For obvious reasons, open source tools, relying on open standards, are emphasized: | |
| − | * | + | * Document typesetting: Latex (first class typesetting and math/equation rendering, [http://en.wikibooks.org/wiki/LaTeX/ wikibook], [http://tobi.oetiker.ch/lshort/lshort.pdf The Not So Short Introduction to LATEX]) |
| − | * | + | ** Latex is used a lot with the emergence and ease of use of https://www.overleaf.com (there are some WYSIWYG editor [http://kile.sourceforge.net Kile] and [http://www.lyx.org Lyx]) |
| − | + | * Bibliographical database: | |
| − | + | ** [http://jabref.sourceforge.net/ JabRef] (the format is Bibtex, for Latex, and can be exported to Word and html among others): the file extension is .bib. Each entry needs a unique key for which I usually use <first author last name><publication year last 2 digits><first word of title>, eg saunier11investigating (see my [http://dl.dropbox.com/u/179169/saunier.bib personal publication bibliography]). Another common pitfall deals with author names: they should be <first name1> <last name1> and <first name2> <last name2> and ... | |
| − | + | ** [https://www.zotero.org/ zotero] is another good tool, with a quick web-based tool to create your bibliography that can be exported to common formats https://zbib.org/ | |
| − | + | * File synchronization: [http://syncthing.net/ syncthing], [http://www.dropbox.com Dropbox] (proprietary), rsync with ssh | |
| − | + | * Remote desktop: clients and servers for the VNC protocol (multi-plateform), TeamViewer (proprietary) | |
| − | ** [ | + | ** see [[Linux_Resources]] for more info to connect to a linux server |
| − | * | + | * Operating system virtualization: VirtualBox |
| − | ** [ | + | * Text editors: emacs (multi-plateforme), atom, sublimetext, jEdit (multi-plateforme), notepad++ (Windows), gedit (Linux) |
| − | * | + | * [[Programming_Resources|Programming resources]], including databases |
| − | * | + | * [[Data_Science_Resources|Data science resources]], including spatial data |
| − | + | * Research Software Engineering with Python https://third-bit.com/py-rse/ | |
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Version actuelle en date du 22 avril 2025 à 16:42
This page lists software tools that are useful for research. For obvious reasons, open source tools, relying on open standards, are emphasized:
- Document typesetting: Latex (first class typesetting and math/equation rendering, wikibook, The Not So Short Introduction to LATEX)
- Latex is used a lot with the emergence and ease of use of https://www.overleaf.com (there are some WYSIWYG editor Kile and Lyx)
- Bibliographical database:
- JabRef (the format is Bibtex, for Latex, and can be exported to Word and html among others): the file extension is .bib. Each entry needs a unique key for which I usually use <first author last name><publication year last 2 digits><first word of title>, eg saunier11investigating (see my personal publication bibliography). Another common pitfall deals with author names: they should be <first name1> <last name1> and <first name2> <last name2> and ...
- zotero is another good tool, with a quick web-based tool to create your bibliography that can be exported to common formats https://zbib.org/
- File synchronization: syncthing, Dropbox (proprietary), rsync with ssh
- Remote desktop: clients and servers for the VNC protocol (multi-plateform), TeamViewer (proprietary)
- see Linux_Resources for more info to connect to a linux server
- Operating system virtualization: VirtualBox
- Text editors: emacs (multi-plateforme), atom, sublimetext, jEdit (multi-plateforme), notepad++ (Windows), gedit (Linux)
- Programming resources, including databases
- Data science resources, including spatial data
- Research Software Engineering with Python https://third-bit.com/py-rse/
